BLASTX nr result
ID: Coptis24_contig00029523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029523 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002336746.1| predicted protein [Populus trichocarpa] gi|2... 131 5e-29 ref|XP_002533079.1| isoamylase, putative [Ricinus communis] gi|2... 127 9e-28 ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Viti... 127 9e-28 gb|AAZ81836.1| isoamylase isoform 2 [Pisum sativum] 113 1e-23 gb|AAN15318.1| isoamylase isoform 2 [Solanum tuberosum] 112 3e-23 >ref|XP_002336746.1| predicted protein [Populus trichocarpa] gi|222836652|gb|EEE75045.1| predicted protein [Populus trichocarpa] Length = 283 Score = 131 bits (330), Expect = 5e-29 Identities = 61/86 (70%), Positives = 67/86 (77%) Frame = +1 Query: 1 GQSSSGSPLYGHRKPFDWDALRTTFGVQITLFIAFLTSLRTRRGDFLQKRNFMKVENVDW 180 GQSS GS YG RKPFDW+AL T FG+Q T FI+FL+SLR RR D LQKRNF+K EN+DW Sbjct: 115 GQSSGGSTSYGSRKPFDWNALSTGFGIQTTQFISFLSSLRMRRSDLLQKRNFLKEENIDW 174 Query: 181 QGSDQAQPRWEDPSSKFLTMILKADN 258 GSDQ PRWEDPS KFL M LK DN Sbjct: 175 HGSDQNPPRWEDPSCKFLAMTLKVDN 200 >ref|XP_002533079.1| isoamylase, putative [Ricinus communis] gi|223527143|gb|EEF29318.1| isoamylase, putative [Ricinus communis] Length = 872 Score = 127 bits (319), Expect = 9e-28 Identities = 58/90 (64%), Positives = 71/90 (78%) Frame = +1 Query: 1 GQSSSGSPLYGHRKPFDWDALRTTFGVQITLFIAFLTSLRTRRGDFLQKRNFMKVENVDW 180 GQSS GS YG RKPFDW+AL T+FG Q+T FI+FL+SLR RR D LQKRNF+K EN+DW Sbjct: 699 GQSSRGSISYGDRKPFDWNALSTSFGNQMTQFISFLSSLRMRRSDLLQKRNFLKEENIDW 758 Query: 181 QGSDQAQPRWEDPSSKFLTMILKADNDDTE 270 G+DQ+ PRWEDP+ KFL M LK D +++ Sbjct: 759 HGNDQSPPRWEDPTCKFLAMTLKIDKAESQ 788 >ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Vitis vinifera] Length = 882 Score = 127 bits (319), Expect = 9e-28 Identities = 55/86 (63%), Positives = 72/86 (83%) Frame = +1 Query: 1 GQSSSGSPLYGHRKPFDWDALRTTFGVQITLFIAFLTSLRTRRGDFLQKRNFMKVENVDW 180 GQSS GSP YG RKPF+W++++T FG+Q FI+FL+SLR+RR D LQ+R+F+K E++DW Sbjct: 709 GQSSGGSPAYGDRKPFNWNSVKTGFGIQTIQFISFLSSLRSRRSDLLQRRSFLKEESIDW 768 Query: 181 QGSDQAQPRWEDPSSKFLTMILKADN 258 GSDQ+ PRW+DPSSKFL M LKA+N Sbjct: 769 HGSDQSPPRWDDPSSKFLAMTLKAEN 794 >gb|AAZ81836.1| isoamylase isoform 2 [Pisum sativum] Length = 857 Score = 113 bits (283), Expect = 1e-23 Identities = 52/88 (59%), Positives = 66/88 (75%) Frame = +1 Query: 1 GQSSSGSPLYGHRKPFDWDALRTTFGVQITLFIAFLTSLRTRRGDFLQKRNFMKVENVDW 180 G SS GS G+ KPF+W AL+T FG Q FI+FLTSLRTRR D LQ R+F+K EN++W Sbjct: 684 GHSSGGSLANGNTKPFNWAALKTGFGKQTIQFISFLTSLRTRRSDLLQSRSFLKEENIEW 743 Query: 181 QGSDQAQPRWEDPSSKFLTMILKADNDD 264 +G D+A P+WEDPS KFL M LKA+ ++ Sbjct: 744 RGIDEAPPKWEDPSCKFLAMTLKAERNE 771 >gb|AAN15318.1| isoamylase isoform 2 [Solanum tuberosum] Length = 878 Score = 112 bits (280), Expect = 3e-23 Identities = 51/91 (56%), Positives = 65/91 (71%) Frame = +1 Query: 1 GQSSSGSPLYGHRKPFDWDALRTTFGVQITLFIAFLTSLRTRRGDFLQKRNFMKVENVDW 180 GQSS G P Y RK W+ L+T FG QI FI+FL++LR RR D LQKR F+K EN+ W Sbjct: 693 GQSSGGPPAYDARKSLGWNTLKTGFGTQIAQFISFLSNLRMRRSDLLQKRTFLKEENIQW 752 Query: 181 QGSDQAQPRWEDPSSKFLTMILKADNDDTES 273 GSDQ+ P+W+ PSSKFL M LKAD + +++ Sbjct: 753 HGSDQSPPKWDGPSSKFLAMTLKADAEVSQT 783