BLASTX nr result

ID: Coptis24_contig00029515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029515
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   104   7e-21
emb|CBI22195.3| unnamed protein product [Vitis vinifera]              104   7e-21
emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]   104   7e-21
ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...    97   1e-18

>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
            vinifera]
          Length = 2223

 Score =  104 bits (260), Expect = 7e-21
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353  EEGYQMLRRMCLPVLXXXXXXXXXXXVTGLQKRLILSISDASYEVRLATLKWLLRFLK-- 180
            EE +Q+  R   P                L +RL+LS+S  SYEVR AT+KWLL+FLK  
Sbjct: 1677 EEVFQISHRFSPPTSNLVQTPKMDSTFAKLPERLVLSMSSPSYEVRHATMKWLLQFLKST 1736

Query: 179  WSVGGAYVQSSSDIGSIHQWAITNLQPTLIQLLSKENNPRCTCYILRNLFTWNLLQFHK 3
             SV  +  QSS  +  IH+WA TNLQ TL++LL+ EN+ +CT YILR LFTWNLLQF K
Sbjct: 1737 GSVRESNDQSSDGVMIIHKWAKTNLQATLMKLLTVENHHKCTNYILRILFTWNLLQFQK 1795


>emb|CBI22195.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  104 bits (260), Expect = 7e-21
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353  EEGYQMLRRMCLPVLXXXXXXXXXXXVTGLQKRLILSISDASYEVRLATLKWLLRFLK-- 180
            EE +Q+  R   P                L +RL+LS+S  SYEVR AT+KWLL+FLK  
Sbjct: 1230 EEVFQISHRFSPPTSNLVQTPKMDSTFAKLPERLVLSMSSPSYEVRHATMKWLLQFLKST 1289

Query: 179  WSVGGAYVQSSSDIGSIHQWAITNLQPTLIQLLSKENNPRCTCYILRNLFTWNLLQFHK 3
             SV  +  QSS  +  IH+WA TNLQ TL++LL+ EN+ +CT YILR LFTWNLLQF K
Sbjct: 1290 GSVRESNDQSSDGVMIIHKWAKTNLQATLMKLLTVENHHKCTNYILRILFTWNLLQFQK 1348


>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score =  104 bits (260), Expect = 7e-21
 Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353  EEGYQMLRRMCLPVLXXXXXXXXXXXVTGLQKRLILSISDASYEVRLATLKWLLRFLK-- 180
            EE +Q+  R   P                L +RL+LS+S  SYEVR AT+KWLL+FLK  
Sbjct: 1615 EEVFQISHRFSPPTSNLVQTPKMDSTFAKLPERLVLSMSSXSYEVRHATMKWLLQFLKST 1674

Query: 179  WSVGGAYVQSSSDIGSIHQWAITNLQPTLIQLLSKENNPRCTCYILRNLFTWNLLQFHK 3
             SV  +  QSS  +  IH+WA TNLQ TL++LL+ EN+ +CT YILR LFTWNLLQF K
Sbjct: 1675 GSVRESNDQSSDGVMIIHKWAKTNLQATLMKLLTVENHHKCTNYILRILFTWNLLQFQK 1733


>ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|222848947|gb|EEE86494.1|
            predicted protein [Populus trichocarpa]
          Length = 2134

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266  LQKRLILSISDASYEVRLATLKWLLRFLKW--SVGGAYVQSSSDIGSIHQWAITNLQPTL 93
            L+KRLI S++D+SYEVRLATLKWLL+FLK   S+   +  SSS IG I  W+  NLQ T+
Sbjct: 1628 LEKRLISSLTDSSYEVRLATLKWLLKFLKSTESISDVHHLSSSAIGIIQHWSKPNLQETM 1687

Query: 92   IQLLSKENNPRCTCYILRNLFTWNLLQFHK 3
            ++LL  E   RC  YILR L+TWNLLQF K
Sbjct: 1688 VKLLDSEKYHRCKYYILRILYTWNLLQFQK 1717


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
            gi|223543500|gb|EEF45031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2190

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = -3

Query: 272  TGLQKRLILSISDASYEVRLATLKWLLRFLKWSVGGAYVQS--SSDIGSIHQWAITNLQP 99
            TGL +RLI S+SD+SYEVRLATLKWLL+FLK +     V    SS + SI QW   NLQ 
Sbjct: 1674 TGLPERLIRSLSDSSYEVRLATLKWLLKFLKSTESKIEVHGIFSSGVRSIQQWNNANLQA 1733

Query: 98   TLIQLLSKENNPRCTCYILRNLFTWNLLQFHK 3
            T+++LL+ E N RC  YILR L  WNL+QF K
Sbjct: 1734 TMLKLLNSEENHRCMNYILRILSFWNLVQFKK 1765


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