BLASTX nr result
ID: Coptis24_contig00029509
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029509 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 238 4e-61 ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|2... 233 9e-60 ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 232 3e-59 ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 231 5e-59 ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 231 6e-59 >ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis vinifera] Length = 587 Score = 238 bits (607), Expect = 4e-61 Identities = 114/134 (85%), Positives = 122/134 (91%) Frame = -1 Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315 LVSCFHIKRFEHSS RNMSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF+F DE D Sbjct: 450 LVSCFHIKRFEHSSIRNMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFSFDGDEPD 509 Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135 S EL SEFELFAVVTH GKLDAGHYVTYLRLSN+WYKCDD+WI QV+ENIVRA Q YM+ Sbjct: 510 ASNELSSEFELFAVVTHTGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMM 569 Query: 134 FYVQKMFYFKASER 93 FYVQKM Y+KASE+ Sbjct: 570 FYVQKMLYYKASEK 583 >ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|222866050|gb|EEF03181.1| predicted protein [Populus trichocarpa] Length = 566 Score = 233 bits (595), Expect = 9e-60 Identities = 111/134 (82%), Positives = 120/134 (89%) Frame = -1 Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315 LVSCFHIKRFEHSS R MSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF F DE+D Sbjct: 429 LVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDEAD 488 Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135 S E+ SEFELFAVVTH GKLD+GHYVTYLRLSN+WYKCDDSWI QV+ENIVRA Q YM+ Sbjct: 489 ASNEMSSEFELFAVVTHTGKLDSGHYVTYLRLSNQWYKCDDSWITQVNENIVRAAQGYMM 548 Query: 134 FYVQKMFYFKASER 93 FYVQKM Y+KA E+ Sbjct: 549 FYVQKMLYYKAGEK 562 >ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355510509|gb|AES91651.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] Length = 671 Score = 232 bits (591), Expect = 3e-59 Identities = 110/134 (82%), Positives = 120/134 (89%) Frame = -1 Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315 LVSCFHIKRFEHSS + MSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIF F DE D Sbjct: 534 LVSCFHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPD 593 Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135 S +L SEFELFAVVTH+GKLDAGHYVTYLRLSN+WYKCDDSW+ QV ENIVRA Q YM+ Sbjct: 594 ASNDLCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMM 653 Query: 134 FYVQKMFYFKASER 93 FYVQKM Y+KA+++ Sbjct: 654 FYVQKMLYYKATDK 667 >ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine max] Length = 592 Score = 231 bits (589), Expect = 5e-59 Identities = 109/134 (81%), Positives = 121/134 (90%) Frame = -1 Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315 LVSCFHIKRFEHSS+R MSRKVDRYLQFPFSLDMSPYLSS+ILR+RFGNRIF F DE D Sbjct: 455 LVSCFHIKRFEHSSTRKMSRKVDRYLQFPFSLDMSPYLSSTILRNRFGNRIFPFDGDEPD 514 Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135 S EL SEFELFAVVTH+GKLDAGHYVTYLRLSN+WYKCDD+W+ QV ENIVRA Q YM+ Sbjct: 515 ASDELCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDAWVTQVDENIVRAAQCYMM 574 Query: 134 FYVQKMFYFKASER 93 FYVQKM Y+KA+++ Sbjct: 575 FYVQKMLYYKATDK 588 >ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis sativus] gi|449518463|ref|XP_004166261.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis sativus] Length = 602 Score = 231 bits (588), Expect = 6e-59 Identities = 111/138 (80%), Positives = 120/138 (86%) Frame = -1 Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315 LVSCFHIKRFEHSS R MSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF F DE D Sbjct: 465 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDELD 524 Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135 E+ SEFELFAV+TH GKLDAGHYVTYLRLSN+WYKCDD+WI QV+ENIVRA Q YM+ Sbjct: 525 GCNEMSSEFELFAVITHKGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMM 584 Query: 134 FYVQKMFYFKASERLGTS 81 FYVQKM Y+KASE+ S Sbjct: 585 FYVQKMLYYKASEKQSAS 602