BLASTX nr result

ID: Coptis24_contig00029509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029509
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   238   4e-61
ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|2...   233   9e-60
ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   232   3e-59
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   231   5e-59
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   231   6e-59

>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  238 bits (607), Expect = 4e-61
 Identities = 114/134 (85%), Positives = 122/134 (91%)
 Frame = -1

Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315
           LVSCFHIKRFEHSS RNMSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF+F  DE D
Sbjct: 450 LVSCFHIKRFEHSSIRNMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFSFDGDEPD 509

Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135
            S EL SEFELFAVVTH GKLDAGHYVTYLRLSN+WYKCDD+WI QV+ENIVRA Q YM+
Sbjct: 510 ASNELSSEFELFAVVTHTGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMM 569

Query: 134 FYVQKMFYFKASER 93
           FYVQKM Y+KASE+
Sbjct: 570 FYVQKMLYYKASEK 583


>ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|222866050|gb|EEF03181.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score =  233 bits (595), Expect = 9e-60
 Identities = 111/134 (82%), Positives = 120/134 (89%)
 Frame = -1

Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315
           LVSCFHIKRFEHSS R MSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF F  DE+D
Sbjct: 429 LVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDEAD 488

Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135
            S E+ SEFELFAVVTH GKLD+GHYVTYLRLSN+WYKCDDSWI QV+ENIVRA Q YM+
Sbjct: 489 ASNEMSSEFELFAVVTHTGKLDSGHYVTYLRLSNQWYKCDDSWITQVNENIVRAAQGYMM 548

Query: 134 FYVQKMFYFKASER 93
           FYVQKM Y+KA E+
Sbjct: 549 FYVQKMLYYKAGEK 562


>ref|XP_003609454.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355510509|gb|AES91651.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 671

 Score =  232 bits (591), Expect = 3e-59
 Identities = 110/134 (82%), Positives = 120/134 (89%)
 Frame = -1

Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315
           LVSCFHIKRFEHSS + MSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIF F  DE D
Sbjct: 534 LVSCFHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPD 593

Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135
            S +L SEFELFAVVTH+GKLDAGHYVTYLRLSN+WYKCDDSW+ QV ENIVRA Q YM+
Sbjct: 594 ASNDLCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMM 653

Query: 134 FYVQKMFYFKASER 93
           FYVQKM Y+KA+++
Sbjct: 654 FYVQKMLYYKATDK 667


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  231 bits (589), Expect = 5e-59
 Identities = 109/134 (81%), Positives = 121/134 (90%)
 Frame = -1

Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315
           LVSCFHIKRFEHSS+R MSRKVDRYLQFPFSLDMSPYLSS+ILR+RFGNRIF F  DE D
Sbjct: 455 LVSCFHIKRFEHSSTRKMSRKVDRYLQFPFSLDMSPYLSSTILRNRFGNRIFPFDGDEPD 514

Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135
            S EL SEFELFAVVTH+GKLDAGHYVTYLRLSN+WYKCDD+W+ QV ENIVRA Q YM+
Sbjct: 515 ASDELCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDAWVTQVDENIVRAAQCYMM 574

Query: 134 FYVQKMFYFKASER 93
           FYVQKM Y+KA+++
Sbjct: 575 FYVQKMLYYKATDK 588


>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/138 (80%), Positives = 120/138 (86%)
 Frame = -1

Query: 494 LVSCFHIKRFEHSSSRNMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDESD 315
           LVSCFHIKRFEHSS R MSRKVDRYLQFPFSLDM+PYLSSSILRSRFGNRIF F  DE D
Sbjct: 465 LVSCFHIKRFEHSSVRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDELD 524

Query: 314 ISTELPSEFELFAVVTHAGKLDAGHYVTYLRLSNRWYKCDDSWIGQVSENIVRATQAYMI 135
              E+ SEFELFAV+TH GKLDAGHYVTYLRLSN+WYKCDD+WI QV+ENIVRA Q YM+
Sbjct: 525 GCNEMSSEFELFAVITHKGKLDAGHYVTYLRLSNQWYKCDDAWITQVNENIVRAAQGYMM 584

Query: 134 FYVQKMFYFKASERLGTS 81
           FYVQKM Y+KASE+   S
Sbjct: 585 FYVQKMLYYKASEKQSAS 602


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