BLASTX nr result
ID: Coptis24_contig00029493
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029493 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vi... 77 3e-29 emb|CAN66466.1| hypothetical protein VITISV_016563 [Vitis vinifera] 77 3e-29 emb|CBI23302.3| unnamed protein product [Vitis vinifera] 77 3e-29 ref|XP_002316665.1| predicted protein [Populus trichocarpa] gi|2... 76 1e-27 ref|XP_002305650.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-24 >ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vinifera] Length = 579 Score = 77.0 bits (188), Expect(2) = 3e-29 Identities = 36/52 (69%), Positives = 43/52 (82%) Frame = +3 Query: 180 RVLESGSELGKERAAMALQKLTENSENAWSVSGQGGVTAVIRICSTSDSKGE 335 RVLE GSELGKE AA LQKLTENS+N WS+S GGVTA+++ICS+ + KGE Sbjct: 250 RVLECGSELGKEGAARCLQKLTENSDNVWSISAHGGVTALLKICSSGNYKGE 301 Score = 76.6 bits (187), Expect(2) = 3e-29 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +1 Query: 1 DDKYVKIVTEADDLISLLVNFLQVAEIGIQEESAKAVSVIVQSNSYRSILVGAGIIAPLI 180 DDKYVKIV E D+ISLL FL E+ IQEESAKA+SVI + Y+S L+GAG+IAPLI Sbjct: 190 DDKYVKIVVEIGDIISLLATFLDSLEMEIQEESAKAISVIAGFDMYKSALIGAGVIAPLI 249 >emb|CAN66466.1| hypothetical protein VITISV_016563 [Vitis vinifera] Length = 549 Score = 77.0 bits (188), Expect(2) = 3e-29 Identities = 36/52 (69%), Positives = 43/52 (82%) Frame = +3 Query: 180 RVLESGSELGKERAAMALQKLTENSENAWSVSGQGGVTAVIRICSTSDSKGE 335 RVLE GSELGKE AA LQKLTENS+N WS+S GGVTA+++ICS+ + KGE Sbjct: 250 RVLECGSELGKEGAARCLQKLTENSDNVWSISAHGGVTALLKICSSGNYKGE 301 Score = 76.6 bits (187), Expect(2) = 3e-29 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +1 Query: 1 DDKYVKIVTEADDLISLLVNFLQVAEIGIQEESAKAVSVIVQSNSYRSILVGAGIIAPLI 180 DDKYVKIV E D+ISLL FL E+ IQEESAKA+SVI + Y+S L+GAG+IAPLI Sbjct: 190 DDKYVKIVVEIGDIISLLATFLDSLEMEIQEESAKAISVIAGFDMYKSALIGAGVIAPLI 249 >emb|CBI23302.3| unnamed protein product [Vitis vinifera] Length = 523 Score = 77.0 bits (188), Expect(2) = 3e-29 Identities = 36/52 (69%), Positives = 43/52 (82%) Frame = +3 Query: 180 RVLESGSELGKERAAMALQKLTENSENAWSVSGQGGVTAVIRICSTSDSKGE 335 RVLE GSELGKE AA LQKLTENS+N WS+S GGVTA+++ICS+ + KGE Sbjct: 331 RVLECGSELGKEGAARCLQKLTENSDNVWSISAHGGVTALLKICSSGNYKGE 382 Score = 76.6 bits (187), Expect(2) = 3e-29 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +1 Query: 1 DDKYVKIVTEADDLISLLVNFLQVAEIGIQEESAKAVSVIVQSNSYRSILVGAGIIAPLI 180 DDKYVKIV E D+ISLL FL E+ IQEESAKA+SVI + Y+S L+GAG+IAPLI Sbjct: 271 DDKYVKIVVEIGDIISLLATFLDSLEMEIQEESAKAISVIAGFDMYKSALIGAGVIAPLI 330 >ref|XP_002316665.1| predicted protein [Populus trichocarpa] gi|222859730|gb|EEE97277.1| predicted protein [Populus trichocarpa] Length = 557 Score = 75.9 bits (185), Expect(2) = 1e-27 Identities = 35/50 (70%), Positives = 45/50 (90%) Frame = +3 Query: 180 RVLESGSELGKERAAMALQKLTENSENAWSVSGQGGVTAVIRICSTSDSK 329 RVLESGSE+ KE AA +LQKLTENS+NAWSVS GGVTA+++IC+++DS+ Sbjct: 228 RVLESGSEISKEGAARSLQKLTENSDNAWSVSAYGGVTALLKICTSADSR 277 Score = 72.0 bits (175), Expect(2) = 1e-27 Identities = 34/60 (56%), Positives = 47/60 (78%) Frame = +1 Query: 1 DDKYVKIVTEADDLISLLVNFLQVAEIGIQEESAKAVSVIVQSNSYRSILVGAGIIAPLI 180 DDKYVKI+ E D++++LV+ L E+ IQ+E+AK VSVI +SY+S+L+GAGII PLI Sbjct: 168 DDKYVKILVEVGDIVNILVSLLDSVELEIQQEAAKVVSVISGFDSYKSVLIGAGIIGPLI 227 >ref|XP_002305650.1| predicted protein [Populus trichocarpa] gi|222848614|gb|EEE86161.1| predicted protein [Populus trichocarpa] Length = 575 Score = 71.2 bits (173), Expect(2) = 1e-24 Identities = 34/52 (65%), Positives = 43/52 (82%) Frame = +3 Query: 180 RVLESGSELGKERAAMALQKLTENSENAWSVSGQGGVTAVIRICSTSDSKGE 335 RVLES SE+ KE AA +LQKLT+NS+NAWSVS GGVTA+++IC++ DS E Sbjct: 246 RVLESRSEISKEGAARSLQKLTQNSDNAWSVSAYGGVTALLKICASVDSTAE 297 Score = 67.0 bits (162), Expect(2) = 1e-24 Identities = 31/60 (51%), Positives = 46/60 (76%) Frame = +1 Query: 1 DDKYVKIVTEADDLISLLVNFLQVAEIGIQEESAKAVSVIVQSNSYRSILVGAGIIAPLI 180 D+KYVKI+ E DL+++LV+ L E+ +Q+++ K V+VI +SY+SIL+GAGII PLI Sbjct: 186 DEKYVKIIVEVGDLVNILVSLLDSMEMELQQDAVKVVAVISGFDSYKSILIGAGIIGPLI 245