BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029469
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...    68   9e-10
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    65   5e-09
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    64   1e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    62   4e-08
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    62   5e-08

>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/82 (39%), Positives = 52/82 (63%)
 Frame = +1

Query: 232 PKKAMSLLSWNSRGSG*PSMMEELKKKIKDVRPIFMFVMETKCSVNKGVSLIKRLGDFES 411
           P   M++LS N RG G P  ++E+ + + + +P  +F+MET+    K + L +RLG   +
Sbjct: 72  PPGTMNVLSLNCRGCGRPEAVQEIHQLVVEKKPAVVFLMETRMGEEKALGLARRLGFQNA 131

Query: 412 FVVPSQGLSGGLWILWEKSVVV 477
            VV S+GLSGGL ++W  +V+V
Sbjct: 132 IVVKSEGLSGGLMLMWHGNVMV 153


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 244 MSLLSWNSRGSG*P---SMMEELKKKIKDVRPIFMFVMETKCSVNKGVSLIKRLGDFESF 414
           M+LLSWN RGSG     S M  L + +   +    F+ ET+ S     SLI R    ++F
Sbjct: 1   MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAF 60

Query: 415 VVPSQGLSGGLWILWEKSVVVEVI 486
           ++P+QG SGGLW++W++   + ++
Sbjct: 61  IIPAQGQSGGLWLIWKQDFSLTIV 84


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/96 (39%), Positives = 54/96 (56%)
 Frame = +1

Query: 232 PKKAMSLLSWNSRGSG*PSMMEELKKKIKDVRPIFMFVMETKCSVNKGVSLIKRLGDFES 411
           P  AM+ LSWN RG G  + ++EL   +K+    F+F+ ET+  V+K   L  RLG    
Sbjct: 430 PSGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGF 489

Query: 412 FVVPSQGLSGGLWILWEKSVVVEVIMSDSWFIHCKI 519
             V S G+SGGL + W +SV VE++  +  FI   I
Sbjct: 490 AGVSSDGMSGGLALFWHESVHVEILNKNERFIDAYI 525


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/93 (39%), Positives = 53/93 (56%)
 Frame = +1

Query: 241 AMSLLSWNSRGSG*PSMMEELKKKIKDVRPIFMFVMETKCSVNKGVSLIKRLGDFESFVV 420
           AM+ LSWN RG G  + ++EL   +K+    F+F+ ET+  V+K   L  RLG      V
Sbjct: 461 AMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGV 520

Query: 421 PSQGLSGGLWILWEKSVVVEVIMSDSWFIHCKI 519
            S G+SGGL + W +SV VE++  +  FI   I
Sbjct: 521 SSDGMSGGLALFWHESVHVEILNKNERFIDAYI 553


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/93 (37%), Positives = 49/93 (52%)
 Frame = +1

Query: 244 MSLLSWNSRGSG*PSMMEELKKKIKDVRPIFMFVMETKCSVNKGVSLIKRLGDFESFVVP 423
           M  L WN RG G P+ ++EL+   KD  P  MF+MET+ S  +  +L   L    SF V 
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 424 SQGLSGGLWILWEKSVVVEVIMSDSWFIHCKIS 522
           S G SGGL + W   V++ +    ++ I   IS
Sbjct: 61  SSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIIS 93