BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029467
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   345   6e-93
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              345   6e-93
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71
ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
gb|ADE77588.1| unknown [Picea sitchensis]                             259   6e-67

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 577

 Score =  345 bits (886), Expect = 6e-93
 Identities = 162/222 (72%), Positives = 190/222 (85%)
 Frame = +3

Query: 3    GLLTKALELIWSMPIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLS 182
            G L +ALELI +MP+ PN+ V GSLLR+CQ+HKDTKL EQVT+ +L+LDP DGGNYVFLS
Sbjct: 356  GYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLS 415

Query: 183  NVYASLNRWSDVETCRELMAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLE 362
            N+YASL+RW DV TCR+LM +RG+ KT GCSSIEV N+VHEFVAGDTSHPQF QIN FL+
Sbjct: 416  NLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLD 475

Query: 363  ELAKKLSGIGHKPDMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIRVVKNLR 542
            E+AK+L G GH P+   VLHDI EEEKE ++R+HSE+IAVAFGLMSTP GK+IRVVKNLR
Sbjct: 476  EIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLR 535

Query: 543  SCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 668
            +C+DCHS +KLIS  FKREIIVRDR RFHHFR+G CSC DYW
Sbjct: 536  TCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  345 bits (886), Expect = 6e-93
 Identities = 162/222 (72%), Positives = 190/222 (85%)
 Frame = +3

Query: 3   GLLTKALELIWSMPIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLS 182
           G L +ALELI +MP+ PN+ V GSLLR+CQ+HKDTKL EQVT+ +L+LDP DGGNYVFLS
Sbjct: 284 GYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLS 343

Query: 183 NVYASLNRWSDVETCRELMAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLE 362
           N+YASL+RW DV TCR+LM +RG+ KT GCSSIEV N+VHEFVAGDTSHPQF QIN FL+
Sbjct: 344 NLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLD 403

Query: 363 ELAKKLSGIGHKPDMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIRVVKNLR 542
           E+AK+L G GH P+   VLHDI EEEKE ++R+HSE+IAVAFGLMSTP GK+IRVVKNLR
Sbjct: 404 EIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLR 463

Query: 543 SCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 668
           +C+DCHS +KLIS  FKREIIVRDR RFHHFR+G CSC DYW
Sbjct: 464 TCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 640

 Score =  275 bits (702), Expect = 1e-71
 Identities = 128/222 (57%), Positives = 166/222 (74%)
 Frame = +3

Query: 3    GLLTKALELIWSMPIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLS 182
            G+L +A  +I SMP  PN+A+WG+LL +C++H DT+L EQV + +L+LDP  GG YV LS
Sbjct: 419  GMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLS 478

Query: 183  NVYASLNRWSDVETCRELMAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLE 362
            N+YA+  RW  V   R +M ER +SKT GCS I++G+ +HEFVAGD+SHPQ   I   L 
Sbjct: 479  NIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLG 538

Query: 363  ELAKKLSGIGHKPDMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIRVVKNLR 542
            E++++L   G+KPD   VL D++EEEKET++ HHSEK+A+AFGL+ T  G +IR+ KNLR
Sbjct: 539  EMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLR 598

Query: 543  SCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 668
             C DCHS  KLISKI+ REIIVRDR RFHHFRDG CSC D+W
Sbjct: 599  VCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640


>ref|XP_002332376.1| predicted protein [Populus trichocarpa] gi|222832200|gb|EEE70677.1|
            predicted protein [Populus trichocarpa]
          Length = 660

 Score =  260 bits (665), Expect = 3e-67
 Identities = 124/222 (55%), Positives = 161/222 (72%)
 Frame = +3

Query: 3    GLLTKALELIWSMPIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLS 182
            G + +A ELI SMP+AP+  V G LL +C++H + + +E+  + +L++DP   G YV LS
Sbjct: 439  GRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLS 498

Query: 183  NVYASLNRWSDVETCRELMAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLE 362
            N+Y S  +W + +  RELMAERG+ K  GCS IEV  VVHEFV GD+SH Q ++IN  LE
Sbjct: 499  NIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLE 558

Query: 363  ELAKKLSGIGHKPDMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIRVVKNLR 542
            ++  KL   G+ PD + VL D+ EEEKET +  HSEK+A+AFGL+ST  G  IRVVKNLR
Sbjct: 559  DMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLR 618

Query: 543  SCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 668
             C+DCHS  KLISK++ REIIVRDRNRFHHF+DG CSCR +W
Sbjct: 619  ICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  259 bits (662), Expect = 6e-67
 Identities = 123/222 (55%), Positives = 155/222 (69%)
 Frame = +3

Query: 3   GLLTKALELIWSMPIAPNAAVWGSLLRSCQLHKDTKLSEQVTEHILKLDPVDGGNYVFLS 182
           G L +A + I  MPI P A+VWG+ L SC++H + +L E+V E +L LDP + G YV LS
Sbjct: 91  GHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLS 150

Query: 183 NVYASLNRWSDVETCRELMAERGISKTAGCSSIEVGNVVHEFVAGDTSHPQFAQINTFLE 362
           N+YA+  RW DV   R++M E+ + K+ GCS IEV N +H FV GD SHPQ   I   LE
Sbjct: 151 NIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLE 210

Query: 363 ELAKKLSGIGHKPDMTFVLHDINEEEKETSVRHHSEKIAVAFGLMSTPEGKSIRVVKNLR 542
            LA+++  +G+ P   FVLHD+ EE KE  +  HSEK+A+AFGL+ST  G SIR+ KNLR
Sbjct: 211 TLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIRITKNLR 270

Query: 543 SCNDCHSFIKLISKIFKREIIVRDRNRFHHFRDGLCSCRDYW 668
            C DCHS  K ISKI KREII+RD NRFHHF+DGLCSC DYW
Sbjct: 271 VCGDCHSATKFISKIVKREIIMRDLNRFHHFKDGLCSCGDYW 312