BLASTX nr result

ID: Coptis24_contig00029380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029380
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putativ...   152   1e-34
emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]   147   4e-33
ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253...   143   4e-32
emb|CBI26728.3| unnamed protein product [Vitis vinifera]              140   4e-31
ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28

>ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
            gi|223531520|gb|EEF33351.1| Chromosome-associated kinesin
            KIF4A, putative [Ricinus communis]
          Length = 1183

 Score =  152 bits (383), Expect = 1e-34
 Identities = 107/277 (38%), Positives = 148/277 (53%), Gaps = 2/277 (0%)
 Frame = +3

Query: 36   SSLSLMSCQLPSVLQEPTFSESPKIEKMQKKVKSSSLNVAGAERYVTATSNFSPEVLRQS 215
            SSLS+  C+   VLQEPT SESPKI   ++ +  SS   A  +  V+ ++NF  EV  QS
Sbjct: 596  SSLSISLCRQSPVLQEPTLSESPKIGNTRRSIAISSAFSASQDG-VSQSANFKSEVF-QS 653

Query: 216  VKVSDQXXXXXXXXXXXXXPTESLAASLHRGLQIIDDHQRXXXXXXXXXXXXFEHLAIKP 395
            +K S+              PTESLAASL RGLQIID HQ+            FEHLA+KP
Sbjct: 654  LKQSEHIRSSLRSSKLFLGPTESLAASLQRGLQIIDHHQQNSASNRSSVAFSFEHLALKP 713

Query: 396  GQAVNQTDASVQTLSPKQTLIDAPATYSICTTCKQAI-NELDEVNGSLNMYNVTFSGPRS 572
               V++  AS+Q L+      D  + Y +C +CKQ I N+ DEV  SL  + +T     +
Sbjct: 714  CAEVDRAYASIQKLAEDAPSSDGSSAYVLCASCKQKINNKSDEVQDSLKTWTLTVDEAGN 773

Query: 573  LEALKGKTHKDGEKDSDEALKIE-KLEKLCAEQEAKIEQLNQLVGQYKQQKEYNLVIENF 749
               L  +  KD +    EA + E +LE +C EQ A+IEQLN+LV QYK +KE + + E+ 
Sbjct: 774  SSKLTDQAAKDEDNGLKEAHRKENELENVCKEQAARIEQLNRLVEQYKLEKELS-IKEHD 832

Query: 750  QETATHDEVYADSVGPVQEFVVEKEDYQLLEAAEENK 860
            QE    D +  +  G   + +   E+Y  L+   E K
Sbjct: 833  QEV---DVLCLE--GSKDQIISRNEEYHSLKEENEVK 864


>emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]
          Length = 1219

 Score =  147 bits (370), Expect = 4e-33
 Identities = 110/310 (35%), Positives = 156/310 (50%), Gaps = 32/310 (10%)
 Frame = +3

Query: 9    SSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI-EKMQKKVKSSSLNVAGAERYVTATS 185
            S  ++P  RSSLS+ SC+    LQ+PT SESP+I   ++K +  SS ++A ++   + + 
Sbjct: 582  SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLA-SQNNASNSF 640

Query: 186  NFSPEVLRQSVKVSDQXXXXXXXXXXXXXPTESLAASLHRGLQIIDDHQRXXXXXXXXXX 365
              + +VL QSVK SDQ             PTESLAASL RGLQIID HQR          
Sbjct: 641  KLNSDVLHQSVKQSDQIRSSLQSSKVIPGPTESLAASLQRGLQIIDYHQRNSASNKSSVA 700

Query: 366  XXFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPATYSICTTCKQ-AINELDEVNGSLNM 542
              FEHLA+KP   V + DASVQ    ++  +DAP+T  +CT+C++   +  DEV  SL  
Sbjct: 701  FSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSTTFLCTSCRRTGFDGSDEVQDSLKR 760

Query: 543  YNVTFSGPRSLEALKGKTHKDGEKDSD---------------------------EALKIE 641
            + V    P +   L    HK     S+                           EA+K +
Sbjct: 761  WIVAADEPGNSNGLANPVHKVCLDSSNLKSNLTLYSICDLCVNLRILFLQYQGAEAMKRQ 820

Query: 642  K-LEKLCAEQEAKIEQLNQLVGQYKQQK--EYNLVIENFQETATHDEVYADSVGPVQEFV 812
            K LE +C EQ AKIEQLN+LV Q +Q    +Y+         A + E+ A  +G      
Sbjct: 821  KELENVCMEQAAKIEQLNRLVEQLQQSSTTKYSQESNTLHLEAGNKEIIA--LGE----- 873

Query: 813  VEKEDYQLLE 842
            ++ E+Y+LL+
Sbjct: 874  IKNEEYKLLK 883


>ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253712 [Vitis vinifera]
          Length = 1212

 Score =  143 bits (361), Expect = 4e-32
 Identities = 104/285 (36%), Positives = 153/285 (53%), Gaps = 7/285 (2%)
 Frame = +3

Query: 9    SSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI-EKMQKKVKSSSLNVAGAERYVTATS 185
            S  ++P  RSSLS+ SC+    LQ+PT SESP+I   ++K +  SS ++A ++   + + 
Sbjct: 600  SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLA-SQNNASNSF 658

Query: 186  NFSPEVLRQSVKVSDQXXXXXXXXXXXXXPTESLAASLHRGLQIIDDHQRXXXXXXXXXX 365
              + +VL QS+K SDQ              TESLAASL RGLQIID HQR          
Sbjct: 659  KLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVA 718

Query: 366  XXFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPATYSICTTCKQ-AINELDEVNGSLNM 542
              FEHLA+KP   V + DASVQ    ++  +DAP+   +CT+C++   +  DEV  SL  
Sbjct: 719  FSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLCTSCRRTGFDGSDEVQDSLKR 778

Query: 543  YNVTFSGPRSLEALKGKTHKDGEKDSD--EALKIEK-LEKLCAEQEAKIEQLNQLVGQYK 713
            + V      +   L    +K     S+  +A+K +K LE +C EQ AKIEQLN+LV Q +
Sbjct: 779  WIVAADESGNSNGLANPVYKVCLDSSNLKKAMKRQKELENVCMEQAAKIEQLNRLVEQLQ 838

Query: 714  QQK--EYNLVIENFQETATHDEVYADSVGPVQEFVVEKEDYQLLE 842
            Q    +Y+         A + E+ A  +G      ++ E+Y+LL+
Sbjct: 839  QSSTTKYSQESNTLHLEAGNKEIIA--LGE-----IKNEEYKLLK 876


>emb|CBI26728.3| unnamed protein product [Vitis vinifera]
          Length = 1174

 Score =  140 bits (353), Expect = 4e-31
 Identities = 93/243 (38%), Positives = 128/243 (52%), Gaps = 2/243 (0%)
 Frame = +3

Query: 9    SSNLDPTIRSSLSLMSCQLPSVLQEPTFSESPKI-EKMQKKVKSSSLNVAGAERYVTATS 185
            S  ++P  RSSLS+ SC+    LQ+PT SESP+I   ++K +  SS ++A ++   + + 
Sbjct: 577  SRTMNPASRSSLSISSCRQSPFLQDPTLSESPRIGNSLRKSIIFSSSSLA-SQNNASNSF 635

Query: 186  NFSPEVLRQSVKVSDQXXXXXXXXXXXXXPTESLAASLHRGLQIIDDHQRXXXXXXXXXX 365
              + +VL QS+K SDQ              TESLAASL RGLQIID HQR          
Sbjct: 636  KLNSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVA 695

Query: 366  XXFEHLAIKPGQAVNQTDASVQTLSPKQTLIDAPATYSICTTCKQ-AINELDEVNGSLNM 542
              FEHLA+KP   V + DASVQ    ++  +DAP+   +CT+C++   +  DEV  SL  
Sbjct: 696  FSFEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLCTSCRRTGFDGSDEVQDSLKR 755

Query: 543  YNVTFSGPRSLEALKGKTHKDGEKDSDEALKIEKLEKLCAEQEAKIEQLNQLVGQYKQQK 722
            + V      +   L    +K   K   E      LE +C EQ AKIEQLN+L    K  +
Sbjct: 756  WIVAADESGNSNGLANPVYKVSMKRQKE------LENVCMEQAAKIEQLNRLSSTTKYSQ 809

Query: 723  EYN 731
            E N
Sbjct: 810  ESN 812


>ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|222846106|gb|EEE83653.1|
            predicted protein [Populus trichocarpa]
          Length = 1178

 Score =  130 bits (326), Expect = 5e-28
 Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
 Frame = +3

Query: 21   DPTIRSSLSLMSCQLPSVLQEPTFSESPKIEKMQKKVKSSSLNVAGAERYVTATSNFSPE 200
            DP +R+S+++  C+  +VL EP  SESPKI   +K +   SL  + ++  ++ +SNF  +
Sbjct: 589  DPPLRTSINISPCRQSAVLHEPMLSESPKIGNTRKSMVIPSL-FSASQNNMSDSSNFQSD 647

Query: 201  VLRQSVKVSDQXXXXXXXXXXXXXPTESLAASLHRGLQIIDDHQRXXXXXXXXXXXXFEH 380
            V  QS+K S+              PTESLAASL RGLQIID HQR            FE 
Sbjct: 648  VPPQSLKQSENIRSSLCSSKMFPGPTESLAASLQRGLQIIDYHQRNSASNRSSVSFSFEP 707

Query: 381  LAIKPGQAVNQTDASVQTLSPKQTLIDAPATYSICTTCKQAINE-LDEVNGSLNMYNVTF 557
            L++KP   V++ + S+Q L+   +         +CT+CKQ IN+  +EV  SL       
Sbjct: 708  LSLKPCSEVDKVNVSLQKLAEHGSYASL-----LCTSCKQKINDSSNEVQDSLTWV---- 758

Query: 558  SGPRSLEALKGKTHKDGEKDSDEALKIEKLEKLCAEQEAKIEQLNQLVGQYKQQKEYNLV 737
                     + +  K  +  S + +K + LE LC EQ  KIEQLNQLV +YKQ++E+ ++
Sbjct: 759  -------VAEEEARKPNQLIS-QVVKEKDLENLCMEQATKIEQLNQLVEKYKQEREHYIM 810


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