BLASTX nr result
ID: Coptis24_contig00029345
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029345 (437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera] 78 8e-13 ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246... 75 7e-12 emb|CBI34670.3| unnamed protein product [Vitis vinifera] 71 8e-11 ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm... 60 2e-07 ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera] Length = 937 Score = 77.8 bits (190), Expect = 8e-13 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 10/150 (6%) Frame = -3 Query: 426 DKTCPLVDKRRSTLLSLNEDSPPSDVSKCRHPTDCNDLSFRFPXXXXXXXXXXXXXXXSF 247 D+ P+++++RS + SLN D S V K C+ + F P F Sbjct: 311 DEEDPVLEEKRSPVKSLNSDLNASSVRK-----PCSQV-FSLPSSPGHFLTRGGSSDGFF 364 Query: 246 NVSKDLKDRKDCTS----------GKFTCNQTISPLDDGNGLLESDTFYSLHKSLSEKVG 97 + +L +R++ ++ KF C+ + P +D N LLE +T +L+KSLS KV Sbjct: 365 EIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVA 424 Query: 96 MQYSPRCAESDNSKDSSRVRVSPFRKMWDP 7 + +SP +ESD S+ S + R +P RKM+DP Sbjct: 425 LPHSPSQSESDYSRTSPKARFNPIRKMFDP 454 >ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera] Length = 758 Score = 74.7 bits (182), Expect = 7e-12 Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 10/150 (6%) Frame = -3 Query: 426 DKTCPLVDKRRSTLLSLNEDSPPSDVSKCRHPTDCNDLSFRFPXXXXXXXXXXXXXXXSF 247 D+ P+++++RS + SLN D S V K C+ + F P Sbjct: 132 DEEDPVLEEKRSPVKSLNSDLNASSVRK-----PCSQV-FSLPSSPGHFLTRGGSSDGFS 185 Query: 246 NVSKDLKDRKDCTS----------GKFTCNQTISPLDDGNGLLESDTFYSLHKSLSEKVG 97 + +L +R++ ++ KF C+ + P +D N LLE +T +L+KSLS KV Sbjct: 186 EIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVA 245 Query: 96 MQYSPRCAESDNSKDSSRVRVSPFRKMWDP 7 + +SP +ESD S+ S + R +P RKM+DP Sbjct: 246 LPHSPSQSESDYSRTSPKARFNPIRKMFDP 275 >emb|CBI34670.3| unnamed protein product [Vitis vinifera] Length = 1085 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/80 (42%), Positives = 49/80 (61%) Frame = -3 Query: 246 NVSKDLKDRKDCTSGKFTCNQTISPLDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAES 67 N S + +R KF C+ + P +D N LLE +T +L+KSLS KV + +SP +ES Sbjct: 692 NHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSES 751 Query: 66 DNSKDSSRVRVSPFRKMWDP 7 D S+ S + R +P RKM+DP Sbjct: 752 DYSRTSPKARFNPIRKMFDP 771 >ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis] gi|223549704|gb|EEF51192.1| conserved hypothetical protein [Ricinus communis] Length = 736 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Frame = -3 Query: 186 QTISPLDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAESD-NSKDSSRVRVSPFRKMWD 10 Q + P +D N LL+ D + H+S S KV M YSP +ESD +SK SS+ R SP +KM+D Sbjct: 193 QVVGPTNDANDLLDKDIALTFHRSHSVKVEMPYSPSPSESDCSSKASSKSRFSPIKKMFD 252 Query: 9 PIM 1 P M Sbjct: 253 PFM 255 >ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1| predicted protein [Populus trichocarpa] Length = 737 Score = 56.6 bits (135), Expect = 2e-06 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = -3 Query: 198 FTCNQTISPLDDGNGLLESDTFYSLHKSLSEKVGMQYSPRCAESDNSKD-SSRVRVSPFR 22 F C Q + PL+DGN LLE DT + KSLS KV + SP + S S SS+ R SP R Sbjct: 194 FKCEQVVGPLNDGNELLERDTALTFQKSLSAKVEIPCSPSSSGSYLSNGASSKSRFSPMR 253 Query: 21 KMWDP 7 M+DP Sbjct: 254 MMFDP 258