BLASTX nr result

ID: Coptis24_contig00029297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029297
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76259.1| hypothetical protein VITISV_001925 [Vitis vinifera]   249   7e-64
ref|XP_002280474.2| PREDICTED: polyphenol oxidase, chloroplastic...   246   3e-63
gb|ACJ76786.1| tyrosinase polyphenol oxidase [Argemone mexicana]      246   4e-63
emb|CBI37659.3| unnamed protein product [Vitis vinifera]              236   5e-60
gb|ABJ90144.1| polyphenol oxidase [Annona cherimola]                  236   5e-60

>emb|CAN76259.1| hypothetical protein VITISV_001925 [Vitis vinifera]
          Length = 963

 Score =  249 bits (635), Expect = 7e-64
 Identities = 121/241 (50%), Positives = 157/241 (65%)
 Frame = -2

Query: 723 EAKRWLRAVLFTIIVVGLFANLFIKDSNEAQHTHAGEHEELSDQQHVHLSTTFSWLKNIV 544
           EA+RW   V  T+++  L   ++I   +E Q+   G+                  LKN++
Sbjct: 328 EARRWGFGVTLTLMLC-LSMRVYIHGVSEDQYAFMGD------------------LKNMI 368

Query: 543 LNLALGDWQSNNIPSSEQPEKPHIVTFTPNLSTCHKSFAKPGFQVYCCPPKPESEESFID 364
           L +++G+    +     +    ++V+  PNL+TCH+S  +PG  VYCCPPKPESEE FID
Sbjct: 369 LGISVGEISPQHHDVDAKKHAKNVVS--PNLTTCHESVPRPGLSVYCCPPKPESEEPFID 426

Query: 363 FKXXXXXXXXXXXXRAHLADKDYIAKYNKALTIMKSLPYEDPRSFRRQADMHCIYCTGAY 184
           F+             AHL D DYIAKY  A++IMKSLPY+DPRSF RQA++HCIYCTGAY
Sbjct: 427 FQFPDXSSPLRLRRAAHLVDDDYIAKYRNAVSIMKSLPYDDPRSFLRQANLHCIYCTGAY 486

Query: 183 NQQYSNASFSIHRQWLFFPWHRMMIYFHERILGSLIGDDTFALPFWQWDAPEGMVTPAMY 4
            Q+ S+    +HR WLFFPWHRMM+YFHERILGSLIGDD+FALPFW WD P+GMV P MY
Sbjct: 487 KQKNSDIPLHVHRSWLFFPWHRMMLYFHERILGSLIGDDSFALPFWNWDNPDGMVIPEMY 546

Query: 3   M 1
           +
Sbjct: 547 V 547


>ref|XP_002280474.2| PREDICTED: polyphenol oxidase, chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  246 bits (629), Expect = 3e-63
 Identities = 119/241 (49%), Positives = 155/241 (64%)
 Frame = -2

Query: 723 EAKRWLRAVLFTIIVVGLFANLFIKDSNEAQHTHAGEHEELSDQQHVHLSTTFSWLKNIV 544
           EA+RW   V  T+++  L   ++I   +E Q+   G+                  LKN++
Sbjct: 11  EARRWGFGVTLTLMLC-LSMRVYIHGVSEDQYAFMGD------------------LKNMI 51

Query: 543 LNLALGDWQSNNIPSSEQPEKPHIVTFTPNLSTCHKSFAKPGFQVYCCPPKPESEESFID 364
           L +++G+    +     +    ++V+  PNL+TCH+S  +PG  VYCCPPKPESEE FID
Sbjct: 52  LGISVGEISPQHHDVDAKKHAKNVVS--PNLTTCHESVPRPGLSVYCCPPKPESEEPFID 109

Query: 363 FKXXXXXXXXXXXXRAHLADKDYIAKYNKALTIMKSLPYEDPRSFRRQADMHCIYCTGAY 184
           F+             AHL D DYIAKY  A++IMKSLPY+DPRSF  QA++HCIYCTGAY
Sbjct: 110 FQFPDPSSPLRLRRAAHLVDDDYIAKYRNAVSIMKSLPYDDPRSFLSQANLHCIYCTGAY 169

Query: 183 NQQYSNASFSIHRQWLFFPWHRMMIYFHERILGSLIGDDTFALPFWQWDAPEGMVTPAMY 4
            Q+ S+    +HR WLFFPWHRMM+YFHERILGSLIGDD+FALPFW WD P+GMV P MY
Sbjct: 170 KQKNSDIPLHVHRSWLFFPWHRMMLYFHERILGSLIGDDSFALPFWNWDNPDGMVIPEMY 229

Query: 3   M 1
           +
Sbjct: 230 V 230


>gb|ACJ76786.1| tyrosinase polyphenol oxidase [Argemone mexicana]
          Length = 589

 Score =  246 bits (628), Expect = 4e-63
 Identities = 119/245 (48%), Positives = 152/245 (62%), Gaps = 3/245 (1%)
 Frame = -2

Query: 726 MEAKRWLRAVLFTIIVVGLFANLFIKDSNEAQHTHAGEHEELSDQQHVHLSTTFSWLKNI 547
           ME KRW+  +    I++ L ++LF+ DS                QQ +   +    LK  
Sbjct: 1   METKRWVSLIFLAFILLVLSSDLFLTDS----------------QQQMKPISFIRDLKKT 44

Query: 546 VLNLALGDWQSNNIPSSE---QPEKPHIVTFTPNLSTCHKSFAKPGFQVYCCPPKPESEE 376
           +L +  G W S    SS    + + P  V  +PNL+TCHKS +     VYCCPPK ES E
Sbjct: 45  ILGIFDGTWVSMETTSSSSTSEKKNPKFVVLSPNLTTCHKSLSDADRPVYCCPPKRESLE 104

Query: 375 SFIDFKXXXXXXXXXXXXRAHLADKDYIAKYNKALTIMKSLPYEDPRSFRRQADMHCIYC 196
             IDF+             AHL D DYIAKYNKA+ IMKSLPY+DPR++ RQA+MHCIYC
Sbjct: 105 PIIDFQFPDISSPIRVRKPAHLVDADYIAKYNKAIAIMKSLPYDDPRNYMRQANMHCIYC 164

Query: 195 TGAYNQQYSNASFSIHRQWLFFPWHRMMIYFHERILGSLIGDDTFALPFWQWDAPEGMVT 16
           TGA+  +++N+   IHR W+FFPWHRMMIYFHERILGSLIGD+ FALP+W WD+P+GM  
Sbjct: 165 TGAFISEHTNSLLKIHRSWMFFPWHRMMIYFHERILGSLIGDENFALPYWNWDSPDGMFI 224

Query: 15  PAMYM 1
           P MY+
Sbjct: 225 PDMYL 229


>emb|CBI37659.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  236 bits (602), Expect = 5e-60
 Identities = 105/183 (57%), Positives = 132/183 (72%)
 Frame = -2

Query: 549 IVLNLALGDWQSNNIPSSEQPEKPHIVTFTPNLSTCHKSFAKPGFQVYCCPPKPESEESF 370
           ++L +++G+    +     +    ++V+  PNL+TCH+S  +PG  VYCCPPKPESEE F
Sbjct: 1   MILGISVGEISPQHHDVDAKKHAKNVVS--PNLTTCHESVPRPGLSVYCCPPKPESEEPF 58

Query: 369 IDFKXXXXXXXXXXXXRAHLADKDYIAKYNKALTIMKSLPYEDPRSFRRQADMHCIYCTG 190
           IDF+             AHL D DYIAKY  A++IMKSLPY+DPRSF  QA++HCIYCTG
Sbjct: 59  IDFQFPDPSSPLRLRRAAHLVDDDYIAKYRNAVSIMKSLPYDDPRSFLSQANLHCIYCTG 118

Query: 189 AYNQQYSNASFSIHRQWLFFPWHRMMIYFHERILGSLIGDDTFALPFWQWDAPEGMVTPA 10
           AY Q+ S+    +HR WLFFPWHRMM+YFHERILGSLIGDD+FALPFW WD P+GMV P 
Sbjct: 119 AYKQKNSDIPLHVHRSWLFFPWHRMMLYFHERILGSLIGDDSFALPFWNWDNPDGMVIPE 178

Query: 9   MYM 1
           MY+
Sbjct: 179 MYV 181


>gb|ABJ90144.1| polyphenol oxidase [Annona cherimola]
          Length = 594

 Score =  236 bits (602), Expect = 5e-60
 Identities = 112/233 (48%), Positives = 147/233 (63%)
 Frame = -2

Query: 702 AVLFTIIVVGLFANLFIKDSNEAQHTHAGEHEELSDQQHVHLSTTFSWLKNIVLNLALGD 523
           ++ F ++ V   +NL +   + A  +       L +  +++ S  F WLKN++  +  G 
Sbjct: 12  SLAFCLVAVAFPSNLLVSCCHAADQSVL-----LGENNNIYASNGFGWLKNLIYEMGGGW 66

Query: 522 WQSNNIPSSEQPEKPHIVTFTPNLSTCHKSFAKPGFQVYCCPPKPESEESFIDFKXXXXX 343
               ++P+  + EK    +  PNL+TCH+S +     VYCCPPKP SEES IDF+     
Sbjct: 67  LSGTHVPAVGEAEKTRS-SLAPNLTTCHRSLSDADRPVYCCPPKPASEESVIDFQFPSPS 125

Query: 342 XXXXXXXRAHLADKDYIAKYNKALTIMKSLPYEDPRSFRRQADMHCIYCTGAYNQQYSNA 163
                   AHL D++YIAKY  A+  MK L Y+ P SF RQA++HCIYCTGAYNQ+ S +
Sbjct: 126 SPLRIRRPAHLLDEEYIAKYEMAVAKMKQLSYDHPHSFMRQANIHCIYCTGAYNQENSTS 185

Query: 162 SFSIHRQWLFFPWHRMMIYFHERILGSLIGDDTFALPFWQWDAPEGMVTPAMY 4
              IHR WLFFP+HRMMIYFHERILG L+GDDTFALP+W WDAP GMV PAMY
Sbjct: 186 LLKIHRSWLFFPFHRMMIYFHERILGKLMGDDTFALPYWNWDAPPGMVIPAMY 238


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