BLASTX nr result

ID: Coptis24_contig00029237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029237
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    74   9e-12
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    70   1e-10
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    63   2e-08

>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/155 (29%), Positives = 78/155 (50%)
 Frame = -3

Query: 490 KLNTNGSMKRNTVGCGGIAIDQYGNIILTYTGGGYQHSVIFQEPKAIEVGLHLCQ*QNIQ 311
           KLNT+GS+ R   G GG+  D  G+ I  Y    +Q+ +   E  AI  GL L     I+
Sbjct: 277 KLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIK 336

Query: 310 KVKVCSDSLRAIQILKGSEEAPWLCCNLIAAIRYEVSRFRDVIFSHVYREVNKSADYLAN 131
            + V SDS+ A++ +   +       + +  I   + +F   + SH +RE NK+AD+L+ 
Sbjct: 337 AIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSK 396

Query: 130 LSVSFDDQYVCNGPPLDSKLSELVSNDVRGMIYLR 26
           + +S +D  V       + L+ ++ +D  G +Y R
Sbjct: 397 MDLSGND-VVLGTADFPNGLNSIIKDDAEGRMYRR 430


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 49/155 (31%), Positives = 73/155 (47%)
 Frame = -3

Query: 490 KLNTNGSMKRNTVGCGGIAIDQYGNIILTYTGGGYQHSVIFQEPKAIEVGLHLCQ*QNIQ 311
           KLNT+GS+     G GG+  D  GN I  +      H +   E  AI  GL L    +IQ
Sbjct: 176 KLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQ 235

Query: 310 KVKVCSDSLRAIQILKGSEEAPWLCCNLIAAIRYEVSRFRDVIFSHVYREVNKSADYLAN 131
            + V SDSL  +  +   +         +  IR  + +F+    SH +RE N++ADYLA 
Sbjct: 236 VLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLAK 295

Query: 130 LSVSFDDQYVCNGPPLDSKLSELVSNDVRGMIYLR 26
           + V  D   V       + L+ ++ +D  GM+Y R
Sbjct: 296 MVVERD--VVLWPADFPTSLNNIIKDDAEGMVYCR 328


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/155 (29%), Positives = 75/155 (48%)
 Frame = -3

Query: 490 KLNTNGSMKRNTVGCGGIAIDQYGNIILTYTGGGYQHSVIFQEPKAIEVGLHLCQ*QNIQ 311
           KLNT+GS+ R   G GG+  D  G+ I  Y    +Q+ +   E  AI  GL L     I+
Sbjct: 164 KLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIK 223

Query: 310 KVKVCSDSLRAIQILKGSEEAPWLCCNLIAAIRYEVSRFRDVIFSHVYREVNKSADYLAN 131
            + V SDS+  ++ +   +       + +  I   + +F     SH +RE NK+AD+L+ 
Sbjct: 224 AIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSR 283

Query: 130 LSVSFDDQYVCNGPPLDSKLSELVSNDVRGMIYLR 26
           + +S  D  V       + L+ ++ +D  G +Y R
Sbjct: 284 MDLSGSD-VVLGTADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/155 (29%), Positives = 73/155 (47%)
 Frame = -3

Query: 490 KLNTNGSMKRNTVGCGGIAIDQYGNIILTYTGGGYQHSVIFQEPKAIEVGLHLCQ*QNIQ 311
           KLNT+GS+ R   G GG+  D  GN I  +        +   E  AI  GL L     I+
Sbjct: 283 KLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIK 342

Query: 310 KVKVCSDSLRAIQILKGSEEAPWLCCNLIAAIRYEVSRFRDVIFSHVYREVNKSADYLAN 131
            + V SDS+ A++ +   +         +  I   + +F +   SH +RE NK+ADYL+ 
Sbjct: 343 VIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSK 402

Query: 130 LSVSFDDQYVCNGPPLDSKLSELVSNDVRGMIYLR 26
           + +  +D  V       + L  ++ +D +G IY R
Sbjct: 403 MVLERND-VVLWPVHFPTTLQNIIKDDAQGRIYCR 436


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 47/155 (30%), Positives = 73/155 (47%)
 Frame = -3

Query: 490 KLNTNGSMKRNTVGCGGIAIDQYGNIILTYTGGGYQHSVIFQEPKAIEVGLHLCQ*QNIQ 311
           KLNT+GS+  NTV  GG+  D  G  I  +     Q  V   E  AI  GL L     I+
Sbjct: 317 KLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIK 376

Query: 310 KVKVCSDSLRAIQILKGSEEAPWLCCNLIAAIRYEVSRFRDVIFSHVYREVNKSADYLAN 131
            + V SDS+  ++ +   +  P      +  I   + +F     SH +RE N++AD+LA 
Sbjct: 377 AIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLAK 435

Query: 130 LSVSFDDQYVCNGPPLDSKLSELVSNDVRGMIYLR 26
           + +  +D  V +       LS ++ +D +G  Y R
Sbjct: 436 MDLLAND-VVLSPVDFPPSLSRIIEDDAKGTKYRR 469


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