BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029220
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22452.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   246   3e-63
ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|3...   229   7e-58
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   224   2e-56
ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   220   3e-55

>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  248 bits (633), Expect = 1e-63
 Identities = 140/251 (55%), Positives = 183/251 (72%), Gaps = 4/251 (1%)
 Frame = -1

Query: 796  GISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFSATEDE 617
            GI+TCEE+L+K  +L ALFS  S DFFLSVGLGLGKTDTPQ R RKSIS+ERTFSAT+D 
Sbjct: 299  GINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTFSATDDT 358

Query: 616  ASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGDILHHA 437
            A L+ KLA+++E LS DMQK+GL GRTLTLKLKTA+FEVR+RAV++QKYI +  DIL+HA
Sbjct: 359  ALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASFEVRSRAVTMQKYICSREDILNHA 418

Query: 436  SKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVESNDSLMXX 263
             KLLNAELPLSLRLIGLR+SHF++DK     D TQK L +FI++G+A+ K     SL+  
Sbjct: 419  LKLLNAELPLSLRLIGLRISHFNEDKDGHLSDPTQKTLANFIISGDASGKNVCEHSLLGS 478

Query: 262  XXXXSHTITDTEMGVPINAYRS--FVSDDYSDSPNFEQLSNSEHRSVLPSNGAGEMEKPD 89
                SH + D E  + I+ + +  +VS+D  DS     LS+ +H +   SN +G+++  +
Sbjct: 479  DTSDSHFMVDPENDLSIDNHETCHYVSEDLLDS---NLLSDLDHCNFNLSNNSGKIDNNN 535

Query: 88   LMSTNGGLNKV 56
             +  NG + KV
Sbjct: 536  ELPLNGSVAKV 546


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  246 bits (629), Expect = 3e-63
 Identities = 139/250 (55%), Positives = 182/250 (72%), Gaps = 4/250 (1%)
 Frame = -1

Query: 796  GISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFSATEDE 617
            GI+TCEE+L+K  +L ALFS  S DFFLSVGLGLGKTDTPQ R RKSIS+ERTFSAT+D 
Sbjct: 299  GINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTFSATDDT 358

Query: 616  ASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGDILHHA 437
            A L+ KLA+++E LS DMQK+GL GRTLTLKLKTA+FEVR+RAV++QKYI +  DIL+HA
Sbjct: 359  ALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASFEVRSRAVTMQKYICSREDILNHA 418

Query: 436  SKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVESNDSLMXX 263
             KLLNAELPLSLRLIGLR+SHF++DK     D TQK L +FI++G+A+ K     SL+  
Sbjct: 419  LKLLNAELPLSLRLIGLRISHFNEDKDGHLSDPTQKTLANFIISGDASGKNVCEHSLLGS 478

Query: 262  XXXXSHTITDTEMGVPINAYRS--FVSDDYSDSPNFEQLSNSEHRSVLPSNGAGEMEKPD 89
                SH + D E  + I+ + +  +VS+D  DS     LS+ +H +   SN +G+++  +
Sbjct: 479  DTSDSHFMVDPENDLSIDNHETCHYVSEDLLDS---NLLSDLDHCNFNLSNNSGKIDNNN 535

Query: 88   LMSTNGGLNK 59
             +  NG + K
Sbjct: 536  ELPLNGSVAK 545


>ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|355511948|gb|AES93571.1|
            DNA polymerase IV [Medicago truncatula]
          Length = 706

 Score =  229 bits (583), Expect = 7e-58
 Identities = 134/255 (52%), Positives = 163/255 (63%), Gaps = 6/255 (2%)
 Frame = -1

Query: 796  GISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFSATEDE 617
            GISTCE++L K +YL ALFS  + DFF SVGLGLGKTD+PQ R RKSIS+ERTFSA+EDE
Sbjct: 320  GISTCEQMLDKGSYLSALFSQSTADFFYSVGLGLGKTDSPQVRFRKSISNERTFSASEDE 379

Query: 616  ASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGDILHHA 437
            A LH KLA++AE LSTDMQK+GL GRTLTLKLKTA+FEVR RAV+LQ YI +S DIL HA
Sbjct: 380  ALLHKKLAELAEMLSTDMQKEGLHGRTLTLKLKTASFEVRNRAVTLQNYINSSDDILKHA 439

Query: 436  SKLLNAELPLSLRLIGLRMSHFDDDK--LSPDVTQKKLTSFIVAGNATAKVESNDSLMXX 263
            SKLL AELP+S+RLIGLR+S F   K   +PD TQK +T+FI +G A  K  S   +   
Sbjct: 440  SKLLKAELPVSVRLIGLRVSQFSGQKCGATPDPTQKTITNFITSGEANRKNSSFSDVTDH 499

Query: 262  XXXXSHTITDTEMGVPINAYRSFVSDDYSDSPNFEQLSNSEHRSVLPSNGAGE----MEK 95
                   +TDTE  + ++   +   D          L  +   S L      E     + 
Sbjct: 500  DF-----VTDTETDLSLDGRHTGQLDSRDPFDGDHSLDVNYQSSTLRKTAGAEKVRTSDN 554

Query: 94   PDLMSTNGGLNKVAG 50
             D  S + G  KV G
Sbjct: 555  ADASSNHSGCTKVLG 569


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
            gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
            polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  224 bits (570), Expect = 2e-56
 Identities = 129/251 (51%), Positives = 167/251 (66%), Gaps = 4/251 (1%)
 Frame = -1

Query: 799  LGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFSATED 620
            LGI+TCEE+L+K  +L ALFS  S DFFLSVGLGLG TDTPQ R RKSIS+ERTF+AT D
Sbjct: 294  LGINTCEEMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPQVRFRKSISNERTFAATTD 353

Query: 619  EASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGDILHH 440
            E  +  KLAD+AE LS DM+K+GL GRTLTLKLKTA+FEVRTRAV+LQKYI +S DIL  
Sbjct: 354  ERLIFQKLADLAEMLSMDMEKEGLTGRTLTLKLKTASFEVRTRAVTLQKYICSSSDILQQ 413

Query: 439  ASKLLNAELPLSLRLIGLRMSHFDDDKLSP--DVTQKKLTSFIVAGNATAKVESNDSLMX 266
            AS+LL AELP+SLRLIGLR+S F++D  +   D TQ  +T FI +G+AT K   +   + 
Sbjct: 414  ASRLLKAELPVSLRLIGLRISQFNEDGATAGLDPTQISITRFITSGDATRKSTGDCCSLN 473

Query: 265  XXXXXSHTITDTEMGVPINAY--RSFVSDDYSDSPNFEQLSNSEHRSVLPSNGAGEMEKP 92
                    + DTE+   I+ Y   S      S+     + SN +  +   +N A + E+P
Sbjct: 474  TDSNNHGFMDDTEIDTCIDGYGTDSETHHQVSNQRIDNKFSNMDDSNCTSTNDAEKSEEP 533

Query: 91   DLMSTNGGLNK 59
            + +  N   ++
Sbjct: 534  ENLLRNASADQ 544


>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  220 bits (560), Expect = 3e-55
 Identities = 131/256 (51%), Positives = 173/256 (67%), Gaps = 7/256 (2%)
 Frame = -1

Query: 796  GISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFSATEDE 617
            GI+TCE++L KS+Y+ A FS  + DFF SVGLGLG+TD+PQ R RKSISSERTFSAT+DE
Sbjct: 294  GINTCEQMLEKSSYICAFFSQSTADFFCSVGLGLGQTDSPQVRFRKSISSERTFSATKDE 353

Query: 616  ASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGDILHHA 437
              LH KL ++AE LS DMQK+GL GRTLTLKLKTA+FEVRTRAV+LQKYI +S DIL HA
Sbjct: 354  VLLHKKLEELAEMLSADMQKEGLSGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHA 413

Query: 436  SKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVESNDSLMXX 263
             KLL AELP+S+RLIGLR+S F+ DK S   D TQK +T+FI +G+      S   +   
Sbjct: 414  KKLLQAELPISVRLIGLRVSQFNGDKCSAKSDPTQKTITNFITSGDVNRNCSSFPDVADH 473

Query: 262  XXXXSHTITDTEMGVPINAYRSFVSDDYSDSPNFEQLSNSEHRS--VLPSNGAGEMEKPD 89
                   +++ E  + I++ R     D+ D  +   LS+ +++S  V  S+G  E++   
Sbjct: 474  DF-----VSNAETDMSIDS-RQTGQLDWRDPFDGNYLSDVDYQSCTVQKSDGVEEVQTSS 527

Query: 88   LMSTN---GGLNKVAG 50
              +T+    GL +V G
Sbjct: 528  NDATSSHYSGLTEVLG 543