BLASTX nr result

ID: Coptis24_contig00029207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029207
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
           VLE     +A R  VLK W  N++  ++ L   PVWV+L ++P E W + GLS VAS VG
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVG 267

Query: 186 GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
            P+  D     RK LS+ARVCVEI  +        L            EY W P  C  C
Sbjct: 268 VPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNC 327

Query: 363 NKFGDSTTKC 392
           N FG +T  C
Sbjct: 328 NVFGHTTALC 337


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
           VLE     +A R  VLK W  N++  ++ L   PVWV+L ++P E W + GLS VAS VG
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVG 267

Query: 186 GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
            P+  D     RK LS+ARVCVEI  +        L            EY W P  C  C
Sbjct: 268 VPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNC 327

Query: 363 NKFGDSTTKC 392
           N FG +T  C
Sbjct: 328 NVFGHTTALC 337



 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6    VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
            VLE     +A R  VLK W  N++  ++ L   PVWV+L ++P E W + GLS VAS VG
Sbjct: 1001 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVG 1060

Query: 186  GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
             P+  D     RK LS+ARVCVEI  +        L            EY W P  C  C
Sbjct: 1061 VPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNC 1120

Query: 363  NKFGDSTTKC 392
            N FG +T  C
Sbjct: 1121 NVFGHTTALC 1130


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
           VLE     +A R  VLK W  N++  ++     PVWV+L ++P E W + GLS VAS +G
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIG 267

Query: 186 GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
            P+  D     RK LS+ARVCVEI  +        L            EY W P  C  C
Sbjct: 268 VPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNC 327

Query: 363 NKFGDSTTKC 392
           N FG +T  C
Sbjct: 328 NVFGHTTALC 337


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/130 (38%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
           VLE     +A    VLK W  N++  ++ L   PVWV L ++P E W + GLS VAS +G
Sbjct: 208 VLERAPWHMANMPLVLKRWQPNMQFLKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIG 267

Query: 186 GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
            P+  D     RK LS+ARVCVEI  +        L            EY W P  C  C
Sbjct: 268 VPLHADHTTFLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNC 327

Query: 363 NKFGDSTTKC 392
           N FG + T C
Sbjct: 328 NVFGHTRTLC 337


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +3

Query: 6   VLEAGSVFIAGRIFVLKPWSVNIEAQRNKLTTPPVWVKLNDLPKELWILDGLSYVASFVG 185
           VLE+    +A R  VLK W  N++  ++ L   PVWV+L ++P E W + GLS VAS +G
Sbjct: 61  VLESAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAIG 120

Query: 186 GPMFMDDAIAKRK*LSFARVCVEIPVNHKYKPTVRL-XXXXXXXXXXXEYTWKPLSCMKC 362
            P+  D     RK LS+ RVCVEI  +        L            EY W P  C   
Sbjct: 121 VPLHADHTTLLRKRLSYVRVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNY 180

Query: 363 NKFGDSTTKC 392
           N FG +T  C
Sbjct: 181 NVFGHTTPLC 190


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