BLASTX nr result

ID: Coptis24_contig00029199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029199
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328469.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
ref|XP_002517257.1| Chitinase 1 precursor, putative [Ricinus com...   177   8e-43
ref|XP_002274616.2| PREDICTED: chitinase 2-like [Vitis vinifera]      177   1e-42
emb|CAN65355.1| hypothetical protein VITISV_012646 [Vitis vinifera]   177   1e-42
ref|XP_004170500.1| PREDICTED: LOW QUALITY PROTEIN: chitinase 2-...   172   2e-41

>ref|XP_002328469.1| predicted protein [Populus trichocarpa] gi|222838184|gb|EEE76549.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  181 bits (459), Expect = 6e-44
 Identities = 84/116 (72%), Positives = 99/116 (85%)
 Frame = +3

Query: 3   KVLASLSGWSLGDKVLAWYNPKDPQKWISNAFSSLQSIVTTYHLDGIDIDYEKFPKHGNN 182
           K LASLSGWSLGD+VL WYNP++PQ WI+NAF+SL S+   YHLDGIDIDYE FP++ N 
Sbjct: 69  KALASLSGWSLGDEVLRWYNPENPQLWINNAFTSLTSLAKEYHLDGIDIDYENFPRN-NA 127

Query: 183 TFAYCIGELLTLLKNQSVITVTSIAPYHLTTQPYIDLHNAYSDVIDYVNYQFYTDK 350
           +FAYCIGEL+TLLKNQSVI+V +IAP+H T  PYI+L N Y DVIDYVN+QFYTDK
Sbjct: 128 SFAYCIGELITLLKNQSVISVATIAPFHTTVLPYIELFNKYGDVIDYVNHQFYTDK 183


>ref|XP_002517257.1| Chitinase 1 precursor, putative [Ricinus communis]
           gi|223543628|gb|EEF45157.1| Chitinase 1 precursor,
           putative [Ricinus communis]
          Length = 269

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/116 (71%), Positives = 97/116 (83%)
 Frame = +3

Query: 3   KVLASLSGWSLGDKVLAWYNPKDPQKWISNAFSSLQSIVTTYHLDGIDIDYEKFPKHGNN 182
           K  ASLSGW+LG KVL WYNPKD Q WISNAFSSL+SI+ +YHLDGIDIDYE FP+  N 
Sbjct: 70  KATASLSGWNLGQKVLRWYNPKDTQLWISNAFSSLKSIIQSYHLDGIDIDYENFPEQ-NA 128

Query: 183 TFAYCIGELLTLLKNQSVITVTSIAPYHLTTQPYIDLHNAYSDVIDYVNYQFYTDK 350
           +FAYCIGEL+TLLKNQSVI+  +IAP+H T  PYI+L + Y +VIDYVN+QFYTDK
Sbjct: 129 SFAYCIGELITLLKNQSVISTATIAPFHTTVIPYIELFDKYGEVIDYVNHQFYTDK 184


>ref|XP_002274616.2| PREDICTED: chitinase 2-like [Vitis vinifera]
          Length = 269

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/116 (69%), Positives = 99/116 (85%)
 Frame = +3

Query: 3   KVLASLSGWSLGDKVLAWYNPKDPQKWISNAFSSLQSIVTTYHLDGIDIDYEKFPKHGNN 182
           + LASLSGWSLG+K+L WY+PKDP+ WISNAF+SLQS++ TY+LDGIDIDYE FPK  N+
Sbjct: 70  RALASLSGWSLGEKILRWYDPKDPELWISNAFTSLQSLIVTYNLDGIDIDYENFPKR-NS 128

Query: 183 TFAYCIGELLTLLKNQSVITVTSIAPYHLTTQPYIDLHNAYSDVIDYVNYQFYTDK 350
           TF YCIGEL++LLKNQSVI+V +IAP++    PYI L + Y D+IDYVNYQFYTDK
Sbjct: 129 TFPYCIGELISLLKNQSVISVATIAPFNSRAVPYIQLCDGYGDLIDYVNYQFYTDK 184


>emb|CAN65355.1| hypothetical protein VITISV_012646 [Vitis vinifera]
          Length = 411

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/116 (69%), Positives = 99/116 (85%)
 Frame = +3

Query: 3   KVLASLSGWSLGDKVLAWYNPKDPQKWISNAFSSLQSIVTTYHLDGIDIDYEKFPKHGNN 182
           + LASLSGWSLG+K+L WY+PKDP+ WISNAF+SLQS++ TY+LDGIDIDYE FPK  N+
Sbjct: 212 RALASLSGWSLGEKILRWYDPKDPELWISNAFTSLQSLIVTYNLDGIDIDYENFPKR-NS 270

Query: 183 TFAYCIGELLTLLKNQSVITVTSIAPYHLTTQPYIDLHNAYSDVIDYVNYQFYTDK 350
           TF YCIGEL++LLKNQSVI+V +IAP++    PYI L + Y D+IDYVNYQFYTDK
Sbjct: 271 TFPYCIGELISLLKNQSVISVATIAPFNSRAVPYIQLCDGYGDLIDYVNYQFYTDK 326


>ref|XP_004170500.1| PREDICTED: LOW QUALITY PROTEIN: chitinase 2-like [Cucumis sativus]
          Length = 267

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/116 (68%), Positives = 95/116 (81%)
 Frame = +3

Query: 3   KVLASLSGWSLGDKVLAWYNPKDPQKWISNAFSSLQSIVTTYHLDGIDIDYEKFPKHGNN 182
           K LASLSGWSL + VL W NP DP  WISNAFS+LQ +V  YHLDGID+DYE FP+HG+N
Sbjct: 70  KALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYENFPRHGSN 129

Query: 183 TFAYCIGELLTLLKNQSVITVTSIAPYHLTTQPYIDLHNAYSDVIDYVNYQFYTDK 350
            FA+CIGEL+TLLKNQSVI+V +IAPY+ T  PY++L + Y  VID+VNYQFYTDK
Sbjct: 130 -FAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFYTDK 184


Top