BLASTX nr result
ID: Coptis24_contig00029191
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029191 (344 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37174.3| unnamed protein product [Vitis vinifera] 65 8e-09 emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera] 62 4e-08 ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus c... 58 9e-07 >emb|CBI37174.3| unnamed protein product [Vitis vinifera] Length = 527 Score = 64.7 bits (156), Expect = 8e-09 Identities = 34/84 (40%), Positives = 48/84 (57%) Frame = -2 Query: 340 ESCLDILAEVVTNTCKGISRDTVSEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLI 161 E LDIL++ + + + T S +Q+V+F W++WRS +SGA +I Sbjct: 300 EKGLDILSKTIRH-----NNWTESHDQLVDFITWSRWRSKNLSYLLDKRTVRLVSGASMI 354 Query: 160 FSAPKVQWLQVFERLKVSNEAHED 89 FSAPKVQW Q+FERL +S E D Sbjct: 355 FSAPKVQWAQLFERLNISGETRGD 378 >emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera] Length = 335 Score = 62.4 bits (150), Expect = 4e-08 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 13/104 (12%) Frame = -2 Query: 340 ESCLDILAEVV---------TNTCKGISRDTV--SEEQVVEFSAWNQWRSXXXXXXXXXX 194 E LDIL++ + +N+ K +++ T S + +V+F W++WRS Sbjct: 192 EKGLDILSKTIRHNNWTESESNSFKKLNQVTSLPSHDXLVDFITWSRWRSXNLSYLLDKR 251 Query: 193 XXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED--LEMIVSL 68 +SGA LIFSAPKVQW Q+FERL +S E D E IV L Sbjct: 252 TVRLVSGASLIFSAPKVQWAQLFERLNISGETRGDDYCETIVDL 295 >ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|222862064|gb|EEE99606.1| predicted protein [Populus trichocarpa] Length = 433 Score = 61.2 bits (147), Expect = 8e-08 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 16/109 (14%) Frame = -2 Query: 343 VESCLDILAEVVTNTCKGISRDTVSEEQV---------------VEFSAWNQWRSXXXXX 209 VE+ LD+L+ + + S ++ EEQ+ V+F WN W+S Sbjct: 213 VETGLDVLSNAIRCSSGTESDSSMLEEQLKLDGAPSSVGEIEQPVDFFTWNHWKSKMVSY 272 Query: 208 XXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED-LEMIVSLI 65 +SGA +IFSAPK+QWLQVFERL S + D L IV L+ Sbjct: 273 FLDKRTIRLVSGASMIFSAPKMQWLQVFERLNTSADCKNDGLSEIVELL 321 >ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus communis] gi|223534117|gb|EEF35834.1| hypothetical protein RCOM_0542810 [Ricinus communis] Length = 406 Score = 57.8 bits (138), Expect = 9e-07 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 38/128 (29%) Frame = -2 Query: 271 SEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHE 92 S +Q+ +F WN W+S ++GA +IFS PK+ W+QVFE++ S + E Sbjct: 265 SVDQLADFITWNCWKSVNLSYFLQKRTIRLVAGASMIFSGPKLSWVQVFEQMNASAKCKE 324 Query: 91 DLEMIVS-------------------------------------LIQIVYLEIETQFKGD 23 D ++ + L ++ EI+TQFKGD Sbjct: 325 DNDLCETIESGILEYLAGVLDGQLHQLWNLSPVLLAIAIPFWSPLFRLYLSEIQTQFKGD 384 Query: 22 TTI-RCCS 2 +++ RCCS Sbjct: 385 SSVMRCCS 392