BLASTX nr result

ID: Coptis24_contig00029191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029191
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37174.3| unnamed protein product [Vitis vinifera]               65   8e-09
emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera]    62   4e-08
ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus c...    58   9e-07

>emb|CBI37174.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = -2

Query: 340 ESCLDILAEVVTNTCKGISRDTVSEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLI 161
           E  LDIL++ + +     +  T S +Q+V+F  W++WRS              +SGA +I
Sbjct: 300 EKGLDILSKTIRH-----NNWTESHDQLVDFITWSRWRSKNLSYLLDKRTVRLVSGASMI 354

Query: 160 FSAPKVQWLQVFERLKVSNEAHED 89
           FSAPKVQW Q+FERL +S E   D
Sbjct: 355 FSAPKVQWAQLFERLNISGETRGD 378


>emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera]
          Length = 335

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
 Frame = -2

Query: 340 ESCLDILAEVV---------TNTCKGISRDTV--SEEQVVEFSAWNQWRSXXXXXXXXXX 194
           E  LDIL++ +         +N+ K +++ T   S + +V+F  W++WRS          
Sbjct: 192 EKGLDILSKTIRHNNWTESESNSFKKLNQVTSLPSHDXLVDFITWSRWRSXNLSYLLDKR 251

Query: 193 XXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED--LEMIVSL 68
               +SGA LIFSAPKVQW Q+FERL +S E   D   E IV L
Sbjct: 252 TVRLVSGASLIFSAPKVQWAQLFERLNISGETRGDDYCETIVDL 295


>ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|222862064|gb|EEE99606.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
 Frame = -2

Query: 343 VESCLDILAEVVTNTCKGISRDTVSEEQV---------------VEFSAWNQWRSXXXXX 209
           VE+ LD+L+  +  +    S  ++ EEQ+               V+F  WN W+S     
Sbjct: 213 VETGLDVLSNAIRCSSGTESDSSMLEEQLKLDGAPSSVGEIEQPVDFFTWNHWKSKMVSY 272

Query: 208 XXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED-LEMIVSLI 65
                    +SGA +IFSAPK+QWLQVFERL  S +   D L  IV L+
Sbjct: 273 FLDKRTIRLVSGASMIFSAPKMQWLQVFERLNTSADCKNDGLSEIVELL 321


>ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus communis]
           gi|223534117|gb|EEF35834.1| hypothetical protein
           RCOM_0542810 [Ricinus communis]
          Length = 406

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 38/128 (29%)
 Frame = -2

Query: 271 SEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHE 92
           S +Q+ +F  WN W+S              ++GA +IFS PK+ W+QVFE++  S +  E
Sbjct: 265 SVDQLADFITWNCWKSVNLSYFLQKRTIRLVAGASMIFSGPKLSWVQVFEQMNASAKCKE 324

Query: 91  DLEMIVS-------------------------------------LIQIVYLEIETQFKGD 23
           D ++  +                                     L ++   EI+TQFKGD
Sbjct: 325 DNDLCETIESGILEYLAGVLDGQLHQLWNLSPVLLAIAIPFWSPLFRLYLSEIQTQFKGD 384

Query: 22  TTI-RCCS 2
           +++ RCCS
Sbjct: 385 SSVMRCCS 392


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