BLASTX nr result

ID: Coptis24_contig00029161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029161
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]    60   3e-07
emb|CAN60722.1| hypothetical protein VITISV_022058 [Vitis vinifera]    59   6e-07
emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera]    58   1e-06
emb|CAN62833.1| hypothetical protein VITISV_012130 [Vitis vinifera]    58   1e-06
emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]    57   2e-06

>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
 Frame = -3

Query: 514  GILSTKSFYFWLWSEIPPPRSRLGPIPN-FPSTIIWCSKVTSKIAFIVWCASLNRVFTFP 338
            G+ + KSF+  L        S++  +P+ FP+ ++W S+V  KI F VW  +  +V T  
Sbjct: 1136 GLFTVKSFFLAL--------SQISGLPSVFPTKLVWNSQVPFKIKFFVWLVAHKKVNTND 1187

Query: 337  *KEMC*GNSXXXXXXXXXXXXXXXXRCVREILIDFCPLCLNEGESVNHNLFWCPFSWGIW 158
              ++                     R  + +  D C LC+  GE+V+H    C  + G+W
Sbjct: 1188 MLQL--------------------RRPYKALSPDICMLCMERGETVDHLFLHCSMTMGLW 1227

Query: 157  SSC-MCRSVSVGLPRFVESATCLMGFKISQTENGRHIWSMIPFAILWGIWLER 2
                    +    PR V     +       ++ G  +W     AILW +W ER
Sbjct: 1228 HRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGIVLWQAACIAILWVVWRER 1280


>emb|CAN60722.1| hypothetical protein VITISV_022058 [Vitis vinifera]
          Length = 1291

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
 Frame = -3

Query: 514  GILSTKSFYFWLWSEIPPPRSRLGPIPNFPSTIIWCSKVTSKIAFIVWCASLNRVFTFP* 335
            G+ + KSF+  L S++P         P FP+  +W S+V  K+   VW  +  +V T   
Sbjct: 1089 GLFTVKSFFTAL-SQMP------NSSPFFPTKFVWKSQVLFKVKAFVWLVTHKKVNTNDL 1141

Query: 334  KEMC*GNSXXXXXXXXXXXXXXXXRCVREILIDFCPLCLNEGESVNHNLFWCPFSWGIWS 155
            +++                     R  + I +D C LC+ +GES +H    C  + G+W 
Sbjct: 1142 RQL--------------------RRPHKAINLDICKLCMEQGESADHLFLHCSVTLGLWH 1181

Query: 154  SCMCRSVSVGLPRFVESATCLMGFK-ISQTENGRHIWSMIPFAILWGIWLER 2
                 +    +P    S    + +K   +++ G  +W     A++W +W ER
Sbjct: 1182 RLFQLAKMDWVPPKSISDMMFINYKGFGKSKRGVILWQNASIALIWVVWQER 1233


>emb|CAN75156.1| hypothetical protein VITISV_042643 [Vitis vinifera]
          Length = 721

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 1/172 (0%)
 Frame = -3

Query: 514 GILSTKSFYFWLWSEIPPPRSRLGPIPNFPSTIIWCSKVTSKIAFIVWCASLNRVFTFP* 335
           G  S KSF++ L  +         P+   P+  +W SKV SK+  + W  +  +V T   
Sbjct: 527 GSFSVKSFFYALSKDS-------NPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDK 579

Query: 334 KEMC*GNSXXXXXXXXXXXXXXXXRCVREILIDFCPLCLNEGESVNHNLFWCPFSWGIWS 155
            ++                     R  + +   +C LC   GES++H    CP + G+W 
Sbjct: 580 LQL--------------------RRPYKALCPQWCILCKRNGESIDHLFLHCPVTIGLWH 619

Query: 154 SCMCRSVSVGL-PRFVESATCLMGFKISQTENGRHIWSMIPFAILWGIWLER 2
                   + + PR +E    +    +  +  G+ +W +    ++W +W ER
Sbjct: 620 RLFNLVGVIWVPPRSIEDMLVISFRGLGNSVRGKILWQIACLTLIWMVWQER 671


>emb|CAN62833.1| hypothetical protein VITISV_012130 [Vitis vinifera]
          Length = 1621

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 1/172 (0%)
 Frame = -3

Query: 514 GILSTKSFYFWLWSEIPPPRSRLGPIPNFPSTIIWCSKVTSKIAFIVWCASLNRVFTFP* 335
           G  S KSF++ L  +         P+   P+  +W SKV SK+  + W  +  +V T   
Sbjct: 557 GSFSVKSFFYALSRDS-------NPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDK 609

Query: 334 KEMC*GNSXXXXXXXXXXXXXXXXRCVREILIDFCPLCLNEGESVNHNLFWCPFSWGIWS 155
            ++                     R  + +   +C LC   GES++H    CP + G+W 
Sbjct: 610 LQL--------------------RRPYKALCPQWCILCKGNGESIDHLFLHCPITIGLWH 649

Query: 154 SCMCRSVSVGL-PRFVESATCLMGFKISQTENGRHIWSMIPFAILWGIWLER 2
                   + + PR +E    +    +  +  G+ +W +    ++W +W ER
Sbjct: 650 RLFNLVGVIWVPPRSIEDMLVISFKGLGNSVRGKILWQIACLTLIWMVWQER 701


>emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]
          Length = 1935

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
 Frame = -3

Query: 514  GILSTKSFYFWLWSEIPPPRSRLGPIPN-FPSTIIWCSKVTSKIAFIVWCASLNRVFTFP 338
            G+ + KSF+  L        S++  +P+ FP+ ++W S+V  KI   VW  +  +V T  
Sbjct: 1736 GLFTVKSFFLAL--------SQISGLPSVFPTKLVWNSQVPFKIKSFVWLVAHKKVNTND 1787

Query: 337  *KEMC*GNSXXXXXXXXXXXXXXXXRCVREILIDFCPLCLNEGESVNHNLFWCPFSWGIW 158
              ++                     R  + +  D C LC+ +GE+V+H    C  + G+W
Sbjct: 1788 MLQL--------------------RRPYKALSPDICMLCMEQGETVDHLFLHCSMTMGLW 1827

Query: 157  SSC-MCRSVSVGLPRFVESATCLMGFKISQTENGRHIWSMIPFAILWGIWLER 2
                    +    PR V     +       ++ G  +W     AILW +W ER
Sbjct: 1828 HRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGIVLWQAACIAILWVVWRER 1880


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