BLASTX nr result

ID: Coptis24_contig00029156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029156
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
gb|ABK95302.1| unknown [Populus trichocarpa]                          183   1e-44
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   183   1e-44
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp....   179   3e-43

>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  183 bits (465), Expect = 1e-44
 Identities = 79/107 (73%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   DISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPEV 182
           DISGCY +RPWA SIW++M+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPEV
Sbjct: 42  DISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEV 101

Query: 183 AWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 323
           AWVT++GK+DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 102 AWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 148


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  183 bits (465), Expect = 1e-44
 Identities = 79/107 (73%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   DISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPEV 182
           DISGCY +RPWA SIW++M+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPEV
Sbjct: 43  DISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEV 102

Query: 183 AWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 323
           AWVT++GK+DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 103 AWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 149


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 501

 Score =  183 bits (464), Expect = 1e-44
 Identities = 79/107 (73%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   DISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPEV 182
           DISGCY +RPWA SIW+VM+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPEV
Sbjct: 46  DISGCYILRPWAMSIWEVMQTFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEV 105

Query: 183 AWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 323
           AWVT++GK+DL++PIAIRPTSE  MYP +SKWIRGHRDLPL+LNQWC
Sbjct: 106 AWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWC 152


>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  179 bits (454), Expect = 2e-43
 Identities = 76/107 (71%), Positives = 93/107 (86%)
 Frame = +3

Query: 3   DISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPEV 182
           DISGCY +RPW+ SIW+ M+ FFD E++KM I+  +FPLF++   L+KEKDHIEGFAPEV
Sbjct: 43  DISGCYILRPWSMSIWETMQAFFDVEIKKMKIKNCYFPLFVSSSVLQKEKDHIEGFAPEV 102

Query: 183 AWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 323
           AWVT+AGK+DL++P+AIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 103 AWVTKAGKSDLEVPVAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 149


>ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322500|gb|EFH52921.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  179 bits (453), Expect = 3e-43
 Identities = 75/107 (70%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   DISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPEV 182
           DISGCY +RPW+ +IW++M+ FFDAE++KM ++  +FPLF++   LEKEKDHIEGFAPEV
Sbjct: 67  DISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPAVLEKEKDHIEGFAPEV 126

Query: 183 AWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 323
           AWVT++GK+DL++PIAIRPTSE  MYP +SKWIRGHRDLPL+LNQWC
Sbjct: 127 AWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWC 173


Top