BLASTX nr result

ID: Coptis24_contig00029133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029133
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL24106.1| unknown protein [Arabidopsis thaliana]                  97   3e-18
ref|NP_565452.1| uncharacterized protein [Arabidopsis thaliana] ...    97   3e-18
ref|XP_002883995.1| hypothetical protein ARALYDRAFT_480532 [Arab...    92   6e-17
ref|XP_003547486.1| PREDICTED: uncharacterized protein LOC100812...    90   3e-16
ref|XP_002514096.1| hypothetical protein RCOM_1046470 [Ricinus c...    89   9e-16

>gb|AAL24106.1| unknown protein [Arabidopsis thaliana]
          Length = 1211

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 67/166 (40%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
 Frame = -3

Query: 451 QWANQRPQKIPCVSRNSNFVSPVSGQ**CIETPKALDL*CSPASY--------------I 314
           QWA+QRPQKI  ++R +N V  VS Q     +    D+ CS   +              +
Sbjct: 458 QWASQRPQKISRIARRTNLVPIVSSQDEVPYSDNISDVGCSETGFGFHKRSPAASPQLKL 517

Query: 313 KRWPIFSRYVISESEESRYAEIKYEDKVKKSNEIGERGGQNVDKVPTQVLPSRKN*VPH- 137
           K    FS   +SESEES + EIK +DK K+S+E+  +  QN+ +V    L SRK+  P  
Sbjct: 518 KGESSFSTAALSESEESGHPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 577

Query: 136 -EELGHKDGVRRQGRTLR*FTSMWYGNPTSLEK*GNASTTKQLRSS 2
            EE+G  DGVRRQGRT R F+S    NP  + K  N  T K LRS+
Sbjct: 578 GEEIG--DGVRRQGRTGRGFSSTRSLNPNGVNKLKNVGTAKHLRSA 621


>ref|NP_565452.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197016|gb|AAC16469.2| expressed protein
           [Arabidopsis thaliana] gi|330251782|gb|AEC06876.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 1211

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 67/166 (40%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
 Frame = -3

Query: 451 QWANQRPQKIPCVSRNSNFVSPVSGQ**CIETPKALDL*CSPASY--------------I 314
           QWA+QRPQKI  ++R +N V  VS Q     +    D+ CS   +              +
Sbjct: 458 QWASQRPQKISRIARRTNLVPIVSSQDEVPYSDNISDVGCSETGFGFHKRSPAASPQLKL 517

Query: 313 KRWPIFSRYVISESEESRYAEIKYEDKVKKSNEIGERGGQNVDKVPTQVLPSRKN*VPH- 137
           K    FS   +SESEES + EIK +DK K+S+E+  +  QN+ +V    L SRK+  P  
Sbjct: 518 KGESSFSTAALSESEESGHPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 577

Query: 136 -EELGHKDGVRRQGRTLR*FTSMWYGNPTSLEK*GNASTTKQLRSS 2
            EE+G  DGVRRQGRT R F+S    NP  + K  N  T K LRS+
Sbjct: 578 GEEIG--DGVRRQGRTGRGFSSTRSLNPNGVNKLKNVGTAKHLRSA 621


>ref|XP_002883995.1| hypothetical protein ARALYDRAFT_480532 [Arabidopsis lyrata subsp.
           lyrata] gi|297329835|gb|EFH60254.1| hypothetical protein
           ARALYDRAFT_480532 [Arabidopsis lyrata subsp. lyrata]
          Length = 1212

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 66/166 (39%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
 Frame = -3

Query: 451 QWANQRPQKIPCVSRNSNFVSPVSGQ**CIETPKALDL*CSPASY--------------I 314
           QWA+QRPQKI  ++R +  V  VS       +    D  CS   +              +
Sbjct: 454 QWASQRPQKISRIARRTTLVPIVSSNDEVPYSDNISDAGCSETGFGFHKRSPAASPQLKL 513

Query: 313 KRWPIFSRYVISESEESRYAEIKYEDKVKKSNEIGERGGQNVDKVPTQVLPSRKN*VPH- 137
           K    FS   +SESEES   EIK +DK K+S+E+  +  QN+ +V    L SRK+  P  
Sbjct: 514 KGESSFSTAALSESEESGPPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAA 573

Query: 136 -EELGHKDGVRRQGRTLR*FTSMWYGNPTSLEK*GNASTTKQLRSS 2
            EE+G  DGVRRQGRT R F+S    NP  ++K  N  T KQLRS+
Sbjct: 574 GEEIG--DGVRRQGRTGRGFSSTRSLNPNGVDKLKNVGTAKQLRSA 617


>ref|XP_003547486.1| PREDICTED: uncharacterized protein LOC100812435 [Glycine max]
          Length = 1287

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 68/164 (41%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
 Frame = -3

Query: 439 QRPQKIPCVSRNSNFVSPVSGQ**CIETPKALDL*C------------------SPASYI 314
           QRPQK    +R +NFV  VS      +   ALD                     SP    
Sbjct: 468 QRPQKSSRTARRTNFVPNVSSN----DDSPALDSVSDVTGNDLGLGFVRRLAGNSPQQIK 523

Query: 313 KRWPIFSRYVISESEESRYAEIKYEDKVKKSNEIGERGGQNVDKVPTQVLPSRKN*VPHE 134
            +    +   +SESEES  AEIK ++K +K  EI ++ GQNV KV   VLP+RKN +   
Sbjct: 524 LKGDSLTSATLSESEESGVAEIKPKEKGRKPEEIDQKAGQNVQKVSNLVLPTRKNKLVSG 583

Query: 133 ELGHKDGVRRQGRTLR*FTSMWYGNPTSLEK*GNASTTKQLRSS 2
           E  H DGVRRQGRT R F S     P + EK GN  T KQLRSS
Sbjct: 584 E-EHGDGVRRQGRTGRNFPSARSPTPVTSEKLGNIGTVKQLRSS 626


>ref|XP_002514096.1| hypothetical protein RCOM_1046470 [Ricinus communis]
           gi|223546552|gb|EEF48050.1| hypothetical protein
           RCOM_1046470 [Ricinus communis]
          Length = 1291

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 75/167 (44%), Positives = 88/167 (52%), Gaps = 16/167 (9%)
 Frame = -3

Query: 454 AQWANQRPQKIPCVSRNSNF---------------VSPVSGQ**CIETPKALDL*CSPAS 320
           A WA QRPQKI   +R +N                VS VSG    +   K L        
Sbjct: 466 AHWAGQRPQKISRAARRTNLIPIVPNNDESPALDTVSDVSGSELGLGFAKRLTGNSPQQV 525

Query: 319 YIKRWPIFSRYVISESEESRYAEIKYEDKVKKSNEIGERGGQNVDKVPTQVLPSRKN-*V 143
            +K  P  S   +SESEES   EIK +DK K+S+EI E+ G NV KV T  L SRKN  V
Sbjct: 526 KLKSEPASSA-ALSESEESGAPEIKSKDKGKRSDEIDEKAGLNVLKVSTLGLQSRKNKLV 584

Query: 142 PHEELGHKDGVRRQGRTLR*FTSMWYGNPTSLEK*GNASTTKQLRSS 2
             E+LG  DGVRRQGRT R  T+     P S+EK GN  T KQLRS+
Sbjct: 585 TGEDLG--DGVRRQGRTGRGSTTRSL-MPMSVEKVGNVGTAKQLRSA 628


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