BLASTX nr result

ID: Coptis24_contig00029041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029041
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL68469.1| Myb-related transcription factor [Rubus idaeus]        133   2e-29
gb|AFL02460.1| transcription factor MYB9 [Fragaria x ananassa]        132   3e-29
gb|AFL02461.1| transcription factor MYB11 [Fragaria x ananassa]       131   5e-29
ref|XP_002279854.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   131   5e-29
gb|ACR83705.1| MYB transcription factor R2R3-like protein [Popul...   131   5e-29

>gb|ACL68469.1| Myb-related transcription factor [Rubus idaeus]
          Length = 87

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/71 (83%), Positives = 62/71 (87%)
 Frame = +1

Query: 49  MGRRPCCAKVGLNRGAWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNY 228
           MGR PCCAK GLNRGAWT +ED ILT YI  +GEGKWR+LPKRAGLKRCGKSCRLRWLNY
Sbjct: 1   MGRSPCCAKEGLNRGAWTAMEDRILTEYIKTHGEGKWRNLPKRAGLKRCGKSCRLRWLNY 60

Query: 229 LNPKIKRGNIT 261
           L P IKRGNIT
Sbjct: 61  LRPDIKRGNIT 71


>gb|AFL02460.1| transcription factor MYB9 [Fragaria x ananassa]
          Length = 271

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/71 (81%), Positives = 64/71 (90%)
 Frame = +1

Query: 49  MGRRPCCAKVGLNRGAWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNY 228
           MGR PCC+K GLNRGAWT LED +LT+YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNY
Sbjct: 1   MGRSPCCSKEGLNRGAWTALEDKVLTSYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNY 60

Query: 229 LNPKIKRGNIT 261
           L P IKRGNI+
Sbjct: 61  LRPDIKRGNIS 71


>gb|AFL02461.1| transcription factor MYB11 [Fragaria x ananassa]
          Length = 308

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/71 (81%), Positives = 61/71 (85%)
 Frame = +1

Query: 49  MGRRPCCAKVGLNRGAWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNY 228
           MGR PCCAK GLNRGAWT +ED  LT YI  +GEGKWR+LPKRAGLKRCGKSCRLRWLNY
Sbjct: 1   MGRSPCCAKEGLNRGAWTAMEDRTLTEYITTHGEGKWRNLPKRAGLKRCGKSCRLRWLNY 60

Query: 229 LNPKIKRGNIT 261
           L P IKRGNIT
Sbjct: 61  LRPDIKRGNIT 71


>ref|XP_002279854.2| PREDICTED: LOW QUALITY PROTEIN: transcription repressor MYB4 [Vitis
           vinifera]
          Length = 265

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/71 (83%), Positives = 63/71 (88%)
 Frame = +1

Query: 49  MGRRPCCAKVGLNRGAWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNY 228
           MGR PCC+K GLNRGAWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNY
Sbjct: 1   MGRSPCCSKEGLNRGAWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNY 60

Query: 229 LNPKIKRGNIT 261
           L P IKRGNI+
Sbjct: 61  LRPDIKRGNIS 71


>gb|ACR83705.1| MYB transcription factor R2R3-like protein [Populus tremuloides]
          Length = 289

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/71 (83%), Positives = 63/71 (88%)
 Frame = +1

Query: 49  MGRRPCCAKVGLNRGAWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNY 228
           MGR PCC+K GLNRGAWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNY
Sbjct: 1   MGRSPCCSKEGLNRGAWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNY 60

Query: 229 LNPKIKRGNIT 261
           L P IKRGNI+
Sbjct: 61  LRPDIKRGNIS 71


Top