BLASTX nr result

ID: Coptis24_contig00028962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028962
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
emb|CBI20194.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glyco...   162   4e-38
emb|CAA61158.1| SIEP1L protein [Beta vulgaris subsp. vulgaris]        160   8e-38
ref|XP_002316859.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|222860487|gb|EEE98034.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/175 (54%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   LVSRVSNVDGSAGPYSLVLEKDRMALYLKSKNSPKPLLYYTTGENPPYQGSIPTSMVFNA 185
           LVSRVSN+DGS GPYS V+E+   ALY K KNSPKPLLYY + E    QGS+   + F  
Sbjct: 157 LVSRVSNMDGSLGPYSFVMEQRYWALYYKVKNSPKPLLYYKSDEFGNGQGSL-AHLNFYC 215

Query: 186 VPANSDAAAYELRYEFQ---AESNWTSMLARPKYNSSFSFLRLESDGDLKIYTFYDKVDW 356
            P    A A+E+ + +    + S+ T +L RPKYNS++S LRLESDG+LKIYT+ + VDW
Sbjct: 216 KPEYEQAYAFEVGFTYDMNNSPSSGTYILTRPKYNSTYSMLRLESDGNLKIYTYNENVDW 275

Query: 357 SAWEVTYSLFGPKEGLDGGNECKLPKKCGSLGLCDKNQCVACPRPKGLKGWSESC 521
            AW++T+ LF     L+  +ECKLP++CGSLG+C+ NQCVACPRP+G  GWS+SC
Sbjct: 276 GAWDLTFKLFDRDSDLE-ISECKLPQRCGSLGVCEDNQCVACPRPQGFLGWSKSC 329


>emb|CBI20194.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/176 (47%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
 Frame = +3

Query: 6   LVSRVSNVDGSAGPYSLVLEKDRMALYLKSKNSPKPLLYYTTGENPPYQGSIPTSMVFNA 185
           LVSR S  D S G YSLV+E  R+A+Y K+ NSPKP+LY T+           T++    
Sbjct: 102 LVSRASEADNSDGKYSLVMEPKRLAMYYKATNSPKPILYATSSVWFTIDKGSLTNVTLTC 161

Query: 186 VPANSDAAAYELRYEFQAESNWTS----MLARPKYNSSFSFLRLESDGDLKIYTFYDKVD 353
            P   +  AY L  ++   ++       +L RPKYNS+ + LRL  DG++++YT+YDKVD
Sbjct: 162 SPDTDEGYAYNLILDYYVSNSQNPSGNRILVRPKYNSTLTILRLGIDGNIRLYTYYDKVD 221

Query: 354 WSAWEVTYSLFGPKEGLDGGNECKLPKKCGSLGLCDKNQCVACPRPKGLKGWSESC 521
           W AWEVTY+LF      D   EC+LP++CG  GLC+ NQCVACP PKGL GWS+ C
Sbjct: 222 WRAWEVTYTLF--DRDSDEETECQLPERCGKFGLCEDNQCVACPSPKGLMGWSKDC 275


>ref|XP_002285446.2| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis
           vinifera]
          Length = 429

 Score =  162 bits (409), Expect = 4e-38
 Identities = 85/175 (48%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   LVSRVSNVDGSAGPYSLVLEKDRMALYLKSKNSPKPLLYYTTGENPPYQGSIPTSMVFNA 185
           LVSR S  D S G YSLV+E  R+A+Y K+ NSPKP+LY              TS V+  
Sbjct: 182 LVSRASEADNSDGKYSLVMEPKRLAMYYKATNSPKPILY-------------ATSSVWFT 228

Query: 186 VPANSDAAAYELRYEFQAESNWTS---MLARPKYNSSFSFLRLESDGDLKIYTFYDKVDW 356
           +   S      L Y + + S   S   +L RPKYNS+ + LRL  DG++++YT+YDKVDW
Sbjct: 229 IDKGS-LTNVTLTYYYVSNSQNPSGNRILVRPKYNSTLTILRLGIDGNIRLYTYYDKVDW 287

Query: 357 SAWEVTYSLFGPKEGLDGGNECKLPKKCGSLGLCDKNQCVACPRPKGLKGWSESC 521
            AWEVTY+LF      D   EC+LP++CG  GLC+ NQCVACP PKGL GWS+ C
Sbjct: 288 RAWEVTYTLF--DRDSDEETECQLPERCGKFGLCEDNQCVACPSPKGLMGWSKDC 340


>emb|CAA61158.1| SIEP1L protein [Beta vulgaris subsp. vulgaris]
          Length = 391

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/177 (46%), Positives = 112/177 (63%), Gaps = 5/177 (2%)
 Frame = +3

Query: 6   LVSRVSNVDGSAGPYSLVLEKDRMALYLKSKNSPKPLLYYTTGENPPYQGSIPTSMVFNA 185
           LVSRVS    S GPY+ V+E   + +Y KS NSPKPLLY++  +      S    + F+ 
Sbjct: 186 LVSRVSAKLNSNGPYTFVMEPRVLTMYYKSPNSPKPLLYFSMLD---LSKSSLKEVTFSC 242

Query: 186 VPANSDAAAYELRYEFQA---ESNWTSMLARPKYNSSFSFLRLESDGDLKIYTFYDKVDW 356
            P N D  AY++ + +Q+        + +ARPKYNS+ S LRL  DG+L+++T+ DKVDW
Sbjct: 243 SPENDDNYAYDITFAYQSIDGSIGGNAEIARPKYNSTLSILRLGIDGNLRVFTYSDKVDW 302

Query: 357 SAWEVTYSLFGPKE--GLDGGNECKLPKKCGSLGLCDKNQCVACPRPKGLKGWSESC 521
           +AWE T++LF      GL    EC+LP++CG  GLC+ +QCVACP PKGL GWS  C
Sbjct: 303 AAWEATFTLFARNSPYGL-SDTECQLPERCGKFGLCEDSQCVACPTPKGLLGWSNKC 358


>ref|XP_002316859.1| predicted protein [Populus trichocarpa] gi|222859924|gb|EEE97471.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  159 bits (403), Expect = 2e-37
 Identities = 84/172 (48%), Positives = 110/172 (63%)
 Frame = +3

Query: 6   LVSRVSNVDGSAGPYSLVLEKDRMALYLKSKNSPKPLLYYTTGENPPYQGSIPTSMVFNA 185
           LVSR S    S G YSLV+E  R+A+Y KS NSPKP +YY    +  Y G +  + + N 
Sbjct: 176 LVSRASETHNSDGAYSLVMEPKRLAMYYKSPNSPKPYIYYDF--DSVYNGRLQNATL-NC 232

Query: 186 VPANSDAAAYELRYEFQAESNWTSMLARPKYNSSFSFLRLESDGDLKIYTFYDKVDWSAW 365
            P   D  A +L  +    +  T  LARPKYNS+ SFLR+  DG LK+YT+ +KVD+ AW
Sbjct: 233 APNGYDDLANDLTLDLSTGNAMT--LARPKYNSTLSFLRIGIDGSLKMYTYNNKVDYQAW 290

Query: 366 EVTYSLFGPKEGLDGGNECKLPKKCGSLGLCDKNQCVACPRPKGLKGWSESC 521
           E TY+LF  ++G   G EC+LP++CG  GLC+ +QCVACP P GL GWS+ C
Sbjct: 291 EETYTLFS-RDGFPEG-ECQLPERCGKFGLCEDSQCVACPLPSGLMGWSKYC 340


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