BLASTX nr result

ID: Coptis24_contig00028945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028945
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Viti...    97   1e-18
ref|XP_004142057.1| PREDICTED: CASP-like protein At3g53850-like ...    92   3e-17
ref|XP_002524228.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002529873.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16

>ref|XP_002272505.1| PREDICTED: CASP-like protein At3g53850 [Vitis vinifera]
           gi|297740318|emb|CBI30500.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 MKSLIGSPGTVSGLVLRVGQFLFASASIGVTLSAFNSLGFSSFCWLLATMVLQVLWSSGL 39
           MK LIGSPGT SGLVLR+GQ +FA+ASIGV +SA     +++FC+L+A+M LQVLWS GL
Sbjct: 1   MKELIGSPGTASGLVLRIGQCMFAAASIGVMVSAIGFSNYTAFCYLIASMGLQVLWSFGL 60

Query: 38  VCFDVCALRIKR 3
            C DV AL+IKR
Sbjct: 61  ACLDVYALKIKR 72


>ref|XP_004142057.1| PREDICTED: CASP-like protein At3g53850-like [Cucumis sativus]
           gi|449519076|ref|XP_004166561.1| PREDICTED: CASP-like
           protein At3g53850-like [Cucumis sativus]
          Length = 155

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 MKSLIGSPGTVSGLVLRVGQFLFASASIGVTLSAFNSLGFSSFCWLLATMVLQVLWSSGL 39
           MK LIG PGTVSGL LR+GQ  FA+ASIGV +SA     F++FC+L+A+M LQVLWS GL
Sbjct: 1   MKHLIGKPGTVSGLALRIGQSAFAAASIGVMVSALGFSSFTAFCYLIASMGLQVLWSFGL 60

Query: 38  VCFDVCALRIKR 3
            C D+ ALR KR
Sbjct: 61  ACLDMYALRRKR 72


>ref|XP_002524228.1| conserved hypothetical protein [Ricinus communis]
           gi|223536505|gb|EEF38152.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 165

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 MKSLIGSPGTVSGLVLRVGQFLFASASIGVTLSAFNSLGFSSFCWLLATMVLQVLWSSGL 39
           MK L GSPG VSGL LRVGQF+FA+ASIGV +SA      ++FC+L+A+M LQVLWS GL
Sbjct: 1   MKELFGSPGRVSGLGLRVGQFVFAAASIGVMVSARGFFNSTAFCYLIASMGLQVLWSFGL 60

Query: 38  VCFDVCALRIKR 3
            C D+ ALR KR
Sbjct: 61  ACLDMHALRSKR 72


>ref|XP_002529873.1| conserved hypothetical protein [Ricinus communis]
           gi|223530649|gb|EEF32523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -3

Query: 218 MKSLIGSPGTVSGLVLRVGQFLFASASIGVTLSAFNSLGFSSFCWLLATMVLQVLWSSGL 39
           MK LIGSPGTVSGLVLR+GQ   A+ASI +  SA     +++FC+L+A+M LQVLWS GL
Sbjct: 1   MKELIGSPGTVSGLVLRIGQCALAAASISIMASARGFSSYTAFCYLIASMGLQVLWSFGL 60

Query: 38  VCFDVCALRIKR 3
            C DV ALR KR
Sbjct: 61  ACLDVYALRRKR 72


>ref|XP_002309085.1| predicted protein [Populus trichocarpa] gi|222855061|gb|EEE92608.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/72 (56%), Positives = 55/72 (76%)
 Frame = -3

Query: 218 MKSLIGSPGTVSGLVLRVGQFLFASASIGVTLSAFNSLGFSSFCWLLATMVLQVLWSSGL 39
           MK +IG PGTVSGL+LR+GQ +FA+ASI +  SA     ++SFC+L+A+M LQ+LWS GL
Sbjct: 1   MKEIIGGPGTVSGLLLRIGQCVFAAASISIMTSAIGFSSYTSFCYLIASMGLQLLWSFGL 60

Query: 38  VCFDVCALRIKR 3
            C D+ ALR K+
Sbjct: 61  ACLDIYALRRKK 72


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