BLASTX nr result

ID: Coptis24_contig00028938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028938
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550514.1| PREDICTED: uncharacterized protein LOC100782...   119   3e-25
ref|XP_002516799.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002314424.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002312735.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003528668.1| PREDICTED: uncharacterized protein LOC100780...   111   5e-23

>ref|XP_003550514.1| PREDICTED: uncharacterized protein LOC100782185 [Glycine max]
          Length = 802

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/106 (60%), Positives = 79/106 (74%)
 Frame = -1

Query: 322 LKLGVVAKLVAALKDPVLRINSARILRNLCAYGRSSDCFIELRXXXXXXXXXXXAIMSEE 143
           LKL V+ KL  ALKDP+LR+N+ARILRNLC Y   S+ FI+L+           AIMSE+
Sbjct: 612 LKLKVLEKLAEALKDPLLRVNAARILRNLCTYS-GSEWFIQLKGVTTAAPIILRAIMSED 670

Query: 142 NKLQEVMLGLAAQVFKYMTSEESSNVFEQTGIEETELATKLIQIMQ 5
           NK+QEVM+GLAA VF+YMTS ESS VFE+ GI E ELA KL+QI++
Sbjct: 671 NKIQEVMIGLAANVFRYMTSHESSIVFEEAGITEAELANKLVQILK 716


>ref|XP_002516799.1| conserved hypothetical protein [Ricinus communis]
           gi|223543887|gb|EEF45413.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 839

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/106 (60%), Positives = 81/106 (76%)
 Frame = -1

Query: 322 LKLGVVAKLVAALKDPVLRINSARILRNLCAYGRSSDCFIELRXXXXXXXXXXXAIMSEE 143
           LKL V+ KLV AL+DP+LR+N+ARILRNLCAY    DCF  L+           AI SEE
Sbjct: 644 LKLKVLEKLVEALEDPLLRVNAARILRNLCAYS-GPDCFSRLKEVTASVPTVLKAIRSEE 702

Query: 142 NKLQEVMLGLAAQVFKYMTSEESSNVFEQTGIEETELATKLIQIMQ 5
           NKLQEVM+GLAA+VFK++TSEESS +FE+ GI+E ELA+ ++QI+Q
Sbjct: 703 NKLQEVMVGLAAEVFKFLTSEESSIMFERPGIKEAELASTILQILQ 748


>ref|XP_002314424.1| predicted protein [Populus trichocarpa] gi|222863464|gb|EEF00595.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/106 (56%), Positives = 81/106 (76%)
 Frame = -1

Query: 322 LKLGVVAKLVAALKDPVLRINSARILRNLCAYGRSSDCFIELRXXXXXXXXXXXAIMSEE 143
           LKL V+ +LV AL+ P+LR+N+ARILRNLC Y R  DCF +L+           A+MSEE
Sbjct: 636 LKLKVLERLVGALEVPLLRVNAARILRNLCTYSRV-DCFDQLKGVAAAVPTVLEAVMSEE 694

Query: 142 NKLQEVMLGLAAQVFKYMTSEESSNVFEQTGIEETELATKLIQIMQ 5
           NKLQEVM+GLAA+ FK+MT +ES+ +FE+TGI+E ELA K++QI++
Sbjct: 695 NKLQEVMVGLAAEAFKFMTPQESNIMFERTGIKEAELANKILQILK 740


>ref|XP_002312735.1| predicted protein [Populus trichocarpa] gi|222852555|gb|EEE90102.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/106 (54%), Positives = 80/106 (75%)
 Frame = -1

Query: 322 LKLGVVAKLVAALKDPVLRINSARILRNLCAYGRSSDCFIELRXXXXXXXXXXXAIMSEE 143
           LKL V+ +LV AL+ P+LR+N+ARILRNLC Y   +DCF +L+           A+MSEE
Sbjct: 637 LKLRVLERLVGALEVPLLRVNAARILRNLCTYS-GADCFDQLKGITAAVPTVLNAVMSEE 695

Query: 142 NKLQEVMLGLAAQVFKYMTSEESSNVFEQTGIEETELATKLIQIMQ 5
           NKLQEVM+GLAA+ FK+MTS+ES+ +F + GI+E ELA K++QI++
Sbjct: 696 NKLQEVMVGLAAEAFKFMTSQESNTMFNRAGIKEAELANKILQILR 741


>ref|XP_003528668.1| PREDICTED: uncharacterized protein LOC100780321 [Glycine max]
          Length = 787

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/106 (57%), Positives = 78/106 (73%)
 Frame = -1

Query: 322 LKLGVVAKLVAALKDPVLRINSARILRNLCAYGRSSDCFIELRXXXXXXXXXXXAIMSEE 143
           LKL V+ +LV ALKDP+LR+N+ARILRNLC Y   S+ FI+L+            I+SEE
Sbjct: 598 LKLKVLERLVEALKDPLLRVNAARILRNLCTYS-GSEWFIQLKGVTAAAPILQA-IISEE 655

Query: 142 NKLQEVMLGLAAQVFKYMTSEESSNVFEQTGIEETELATKLIQIMQ 5
           NK+QEV++GLA  VF+YMTS ESS VFE+ GI E ELA KL+QI++
Sbjct: 656 NKIQEVIVGLAGNVFRYMTSHESSIVFEEAGITEAELANKLVQILK 701


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