BLASTX nr result

ID: Coptis24_contig00028935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028935
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat rece...   281   3e-74
emb|CAN60220.1| hypothetical protein VITISV_011849 [Vitis vinifera]   281   3e-74
ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, ...   279   2e-73
ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|2...   275   3e-72
ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72

>ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat receptor-like
            serine/threonine-protein kinase At2g24130-like [Vitis
            vinifera]
          Length = 975

 Score =  281 bits (720), Expect = 3e-74
 Identities = 139/168 (82%), Positives = 154/168 (91%)
 Frame = -1

Query: 504  KYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDNTRIAVKVLNSKIAGEISESFK 325
            KYPRI+++QLVEATGGF+SS LIGSG+FG +YKG L+DNTRIAVKVL+S+IA EIS SFK
Sbjct: 650  KYPRITHRQLVEATGGFSSSSLIGSGRFGHVYKGVLRDNTRIAVKVLDSRIAAEISGSFK 709

Query: 324  RECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSLENHLYPGQWSRPDLNLVQLVS 145
            RECQVLKRTRHRNLIRIIT CS PDFKALVLPLMSNG LE HLYPG+     LNLVQLVS
Sbjct: 710  RECQVLKRTRHRNLIRIITICSKPDFKALVLPLMSNGCLERHLYPGRDLGHGLNLVQLVS 769

Query: 144  ICSDIAEGVAYLHHHAPVKVVHCDLKPSNILLDDDMTALVTDFGIAKL 1
            ICSD+AEGVAYLHH++PV+VVHCDLKPSNILLD+DMTALVTDFGIAKL
Sbjct: 770  ICSDVAEGVAYLHHYSPVRVVHCDLKPSNILLDEDMTALVTDFGIAKL 817


>emb|CAN60220.1| hypothetical protein VITISV_011849 [Vitis vinifera]
          Length = 884

 Score =  281 bits (720), Expect = 3e-74
 Identities = 139/168 (82%), Positives = 154/168 (91%)
 Frame = -1

Query: 504  KYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDNTRIAVKVLNSKIAGEISESFK 325
            KYPRI+++QLVEATGGF+SS LIGSG+FG +YKG L+DNTRIAVKVL+S+IA EIS SFK
Sbjct: 640  KYPRITHRQLVEATGGFSSSSLIGSGRFGHVYKGVLRDNTRIAVKVLDSRIAAEISGSFK 699

Query: 324  RECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSLENHLYPGQWSRPDLNLVQLVS 145
            RECQVLKRTRHRNLIRIIT CS PDFKALVLPLMSNG LE HLYPG+     LNLVQLVS
Sbjct: 700  RECQVLKRTRHRNLIRIITICSKPDFKALVLPLMSNGCLERHLYPGRDLGHGLNLVQLVS 759

Query: 144  ICSDIAEGVAYLHHHAPVKVVHCDLKPSNILLDDDMTALVTDFGIAKL 1
            ICSD+AEGVAYLHH++PV+VVHCDLKPSNILLD+DMTALVTDFGIAKL
Sbjct: 760  ICSDVAEGVAYLHHYSPVRVVHCDLKPSNILLDEDMTALVTDFGIAKL 807


>ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
            communis] gi|223532194|gb|EEF33999.1| Receptor protein
            kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 960

 Score =  279 bits (713), Expect = 2e-73
 Identities = 137/168 (81%), Positives = 151/168 (89%)
 Frame = -1

Query: 504  KYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDNTRIAVKVLNSKIAGEISESFK 325
            KYPRISYQQLV+ATGGF++S LIGSG+FG +YKG LQDNTRIAVKVL+SK AG IS SFK
Sbjct: 626  KYPRISYQQLVDATGGFSASSLIGSGRFGHVYKGVLQDNTRIAVKVLDSKTAGAISGSFK 685

Query: 324  RECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSLENHLYPGQWSRPDLNLVQLVS 145
            RECQVLKR RHRNLIRIIT CS PDFKALVLPLMSNGSLE +LYP       L+LVQLVS
Sbjct: 686  RECQVLKRARHRNLIRIITICSKPDFKALVLPLMSNGSLERYLYPSHGLNSGLDLVQLVS 745

Query: 144  ICSDIAEGVAYLHHHAPVKVVHCDLKPSNILLDDDMTALVTDFGIAKL 1
            ICSD+AEGVAYLHH++PV+VVHCDLKPSNI+LDDDMTALVTDFGIA+L
Sbjct: 746  ICSDVAEGVAYLHHYSPVRVVHCDLKPSNIVLDDDMTALVTDFGIARL 793


>ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|222855340|gb|EEE92887.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  275 bits (703), Expect = 3e-72
 Identities = 132/168 (78%), Positives = 152/168 (90%)
 Frame = -1

Query: 504  KYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDNTRIAVKVLNSKIAGEISESFK 325
            K+PRISY+QL+EATGGF++S LIGSG+FG +YKG LQDNTRIAVKVL++K AGEIS SFK
Sbjct: 649  KHPRISYRQLIEATGGFSASSLIGSGQFGHVYKGVLQDNTRIAVKVLDTKTAGEISGSFK 708

Query: 324  RECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSLENHLYPGQWSRPDLNLVQLVS 145
            RECQVLKR +HRNLI+IIT CS PDFKALVLPLMSNGSLE HLYP       L+L+QLVS
Sbjct: 709  RECQVLKRAKHRNLIKIITICSKPDFKALVLPLMSNGSLERHLYPSHGLNTGLDLIQLVS 768

Query: 144  ICSDIAEGVAYLHHHAPVKVVHCDLKPSNILLDDDMTALVTDFGIAKL 1
            IC+D+AEGVAYLHH++PV+VVHCDLKPSNILLD+DMTALVTDFGIA+L
Sbjct: 769  ICNDVAEGVAYLHHYSPVRVVHCDLKPSNILLDEDMTALVTDFGIARL 816


>ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|222865956|gb|EEF03087.1|
            predicted protein [Populus trichocarpa]
          Length = 860

 Score =  275 bits (702), Expect = 4e-72
 Identities = 132/168 (78%), Positives = 151/168 (89%)
 Frame = -1

Query: 504  KYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDNTRIAVKVLNSKIAGEISESFK 325
            K+PRISY+QL+EATGGF++S LIGSG+FG +YKG LQDNTRIAVKVL+SK  GEIS SFK
Sbjct: 535  KHPRISYRQLIEATGGFSASSLIGSGRFGHVYKGVLQDNTRIAVKVLDSKEDGEISRSFK 594

Query: 324  RECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSLENHLYPGQWSRPDLNLVQLVS 145
            RECQVLKR +HRNLI+IIT CS PDFKALVLPLMSNGSLE HLYP       L+L+QLVS
Sbjct: 595  RECQVLKRAKHRNLIKIITTCSKPDFKALVLPLMSNGSLEGHLYPSHGLNTGLDLIQLVS 654

Query: 144  ICSDIAEGVAYLHHHAPVKVVHCDLKPSNILLDDDMTALVTDFGIAKL 1
            IC+D+AEGVAYLHH++PV+VVHCDLKPSNILLD+DMTALVTDFGIA+L
Sbjct: 655  ICNDVAEGVAYLHHYSPVRVVHCDLKPSNILLDEDMTALVTDFGIARL 702


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