BLASTX nr result

ID: Coptis24_contig00028931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028931
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    55   6e-06

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 21/79 (26%), Positives = 44/79 (55%)
 Frame = +1

Query: 19  NKATFAKLPWKAMTDKESIWSKTFRAMYGRYWFDVNENPPPHVSWFWKRVHKVAKCISTG 198
           N A  ++  W+ +T+ +S+  +  +A Y  +   ++ +P P +S+ W+ + K    +  G
Sbjct: 443 NLAMLSRQAWRLLTNPDSLCGQVLKARYFPHSDILHCSPRPRISYTWRSILKGVALLKEG 502

Query: 199 LVWSIGKGKDVRAMHQPWL 255
           ++W IG GK+V+    PW+
Sbjct: 503 IIWRIGNGKNVKIWEHPWI 521


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