BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028922
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255...   476   e-132
ref|XP_003530919.1| PREDICTED: uncharacterized protein LOC100809...   461   e-127
ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arab...   439   e-121
ref|NP_566005.1| transcription termination factor domain-contain...   439   e-121

>ref|XP_002279655.1| PREDICTED: uncharacterized protein LOC100255927 [Vitis vinifera]
          Length = 481

 Score =  476 bits (1224), Expect = e-132
 Identities = 242/287 (84%), Positives = 258/287 (89%)
 Frame = +3

Query: 3    AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVL 182
            AYLVSIGVSPRDIGPMVTQYPY LGMRVGTVIKPIVDYLVSLG+PKK+LARMFEKRAYVL
Sbjct: 196  AYLVSIGVSPRDIGPMVTQYPYFLGMRVGTVIKPIVDYLVSLGLPKKVLARMFEKRAYVL 255

Query: 183  GYDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPD 362
            GYDLEE IKPNVDCL+SFGIRREALASVIAQ+PQILGLPLKAKLSSQQYFFNLKLKIDPD
Sbjct: 256  GYDLEECIKPNVDCLVSFGIRREALASVIAQFPQILGLPLKAKLSSQQYFFNLKLKIDPD 315

Query: 363  GFARVIEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVANMVVKCPQLVAQRVELMKNSYY 542
            GFARVIE+MPQ+VSLNQ+VIMKP+EFL GR IPA DVA MVVKCPQLVA RVELMKN YY
Sbjct: 316  GFARVIERMPQIVSLNQNVIMKPVEFLLGRGIPAVDVAKMVVKCPQLVALRVELMKNGYY 375

Query: 543  FFKSEMKRSLQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQ 722
            FFKSEM R ++ELVEFPEYFTYSLESRIKPRYQ L SKGV+ SL WFLNCSDQRFEERLQ
Sbjct: 376  FFKSEMGRQVKELVEFPEYFTYSLESRIKPRYQRLQSKGVRSSLDWFLNCSDQRFEERLQ 435

Query: 723  ADYIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXXILYRRTVSL 863
            ADYIE E+ GPSF +GGKL+LPG+E+V            LYRRTVSL
Sbjct: 436  ADYIEMETIGPSFCMGGKLQLPGNEVVSDEEDESDDEE-LYRRTVSL 481



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
 Frame = +3

Query: 51  VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 230
           + +YP +LG  V   + P++ YL  +GIP+  L         VL   +   + P V  L 
Sbjct: 104 LNEYPLMLGCSVRKNMIPVLGYLEKIGIPRSKLGEFVVNYPQVLHASVVVELAPVVKFLR 163

Query: 231 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVIEKMPQMVSLN 410
              + ++ +  V+ +YP++LG  L+  +S+   +  + + + P     ++ + P  + + 
Sbjct: 164 GLDVDKQDIGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYFLGMR 222

Query: 411 QSVIMKPI-EFLRGRTIPAEDVANMVVK 491
              ++KPI ++L    +P + +A M  K
Sbjct: 223 VGTVIKPIVDYLVSLGLPKKVLARMFEK 250


>ref|XP_003530919.1| PREDICTED: uncharacterized protein LOC100809590 [Glycine max]
          Length = 499

 Score =  461 bits (1185), Expect = e-127
 Identities = 228/287 (79%), Positives = 255/287 (88%)
 Frame = +3

Query: 3    AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVL 182
            AYLVSIGV+PRDIGPMVTQYPYLLGMRVGTVIKP++DYLV LG+PKK+LARM EKRAYVL
Sbjct: 214  AYLVSIGVNPRDIGPMVTQYPYLLGMRVGTVIKPMIDYLVDLGLPKKVLARMLEKRAYVL 273

Query: 183  GYDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPD 362
            GYDLEET+KPNV+CL+SFG+ R+ LAS+IAQYPQILGLPLKAKLS+QQYFF+LKLK+DP+
Sbjct: 274  GYDLEETVKPNVECLISFGVGRDCLASIIAQYPQILGLPLKAKLSTQQYFFSLKLKVDPE 333

Query: 363  GFARVIEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVANMVVKCPQLVAQRVELMKNSYY 542
            GFARV+E MPQ+VSL+Q VIMKP+EFL GRTIPA+DVA+MVVKCPQLVA RVELMKNSYY
Sbjct: 334  GFARVVENMPQVVSLHQHVIMKPVEFLLGRTIPAQDVASMVVKCPQLVALRVELMKNSYY 393

Query: 543  FFKSEMKRSLQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQ 722
            FFKSEM R LQELVEFPEYFTYSLESRIKPRYQ L SKG++ SL W LNCSDQRFEERLQ
Sbjct: 394  FFKSEMGRPLQELVEFPEYFTYSLESRIKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQ 453

Query: 723  ADYIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXXILYRRTVSL 863
              YIETES GP F +GGKLELPG+ +V           +LYRRTVSL
Sbjct: 454  GHYIETESVGPRFCMGGKLELPGNGLV-SDEEEESDDELLYRRTVSL 499



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 6   YLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLG 185
           +L  +G++  DI      YP +LG  V   + P++ YL  +GI +  L    +    VL 
Sbjct: 111 FLQKLGLTVDDIN----NYPLMLGCSVRKNMIPVLGYLEKIGIARPKLGGFVKNYPQVLH 166

Query: 186 YDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDG 365
             +   + P V  L    + ++ +  V+ +YP++LG  L+  +S+   +  + + ++P  
Sbjct: 167 ASVIVELAPVVKFLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYL-VSIGVNPRD 225

Query: 366 FARVIEKMPQMVSLNQSVIMKP-IEFLRGRTIPAEDVANMVVK 491
              ++ + P ++ +    ++KP I++L    +P + +A M+ K
Sbjct: 226 IGPMVTQYPYLLGMRVGTVIKPMIDYLVDLGLPKKVLARMLEK 268


>ref|XP_002327325.1| predicted protein [Populus trichocarpa] gi|222835695|gb|EEE74130.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  456 bits (1174), Expect = e-126
 Identities = 227/289 (78%), Positives = 255/289 (88%), Gaps = 2/289 (0%)
 Frame = +3

Query: 3    AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVL 182
            AYLVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYLVSLG+PKKI+ARM EKR YVL
Sbjct: 226  AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLVSLGLPKKIVARMLEKRPYVL 285

Query: 183  GYDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPD 362
            GYDL+ET+KPNVDCL+SFGIRRE LAS++AQYP ILGLPLKAKLSSQQYFFNLKLKIDP+
Sbjct: 286  GYDLQETVKPNVDCLISFGIRREVLASIVAQYPPILGLPLKAKLSSQQYFFNLKLKIDPE 345

Query: 363  GFARVIEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVANMVVKCPQLVAQRVELMKNSYY 542
             FARVIEKMPQ+VSLNQ+VIMKP++FL  R IP+EDVA MV+KCPQL+A RV LMKNSYY
Sbjct: 346  RFARVIEKMPQIVSLNQNVIMKPVQFLLERAIPSEDVATMVIKCPQLLALRVPLMKNSYY 405

Query: 543  FFKSEMKRSLQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQ 722
            FFKSEM R L+ELVEFPEYFTYSLESRIKPRY+ L SKG++ SL WFLNCSD+RFEERL+
Sbjct: 406  FFKSEMGRPLKELVEFPEYFTYSLESRIKPRYEMLKSKGIRSSLNWFLNCSDKRFEERLE 465

Query: 723  ADYIETESAGPSFYVGGKLELPGSEIV--XXXXXXXXXXXILYRRTVSL 863
             DYIE+ES GPSF +GGKLELPG EI+             +L+RRTVSL
Sbjct: 466  GDYIESESLGPSFCMGGKLELPGCEILSDEEDEIDDDEDEVLFRRTVSL 514



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 4/227 (1%)
 Frame = +3

Query: 6   YLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLG 185
           YL  IG+S   +G  V  YP +L   V   ++P++ +L  L + K  +  + +K   +LG
Sbjct: 155 YLEKIGISRSKLGEFVKSYPQVLHASVVVELQPVIKFLRGLDVDKLDIGYVLQKYPELLG 214

Query: 186 YDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDG 365
           + LE T+  +V  L+S G+    +  ++ QYP +LG+ +   +     +  + L +    
Sbjct: 215 FKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYL-VSLGLPKKI 273

Query: 366 FARVIEKMPQMVSLNQSVIMKP-IEFLRGRTIPAEDVANMVVKCPQLVAQRVEL-MKNSY 539
            AR++EK P ++  +    +KP ++ L    I  E +A++V + P ++   ++  + +  
Sbjct: 274 VARMLEKRPYVLGYDLQETVKPNVDCLISFGIRREVLASIVAQYPPILGLPLKAKLSSQQ 333

Query: 540 YFFKSEMKRSLQELVEFPEYFTYSLES--RIKPRYQSLSSKGVKFSL 674
           YFF  ++K         PE F   +E   +I    Q++  K V+F L
Sbjct: 334 YFFNLKLKID-------PERFARVIEKMPQIVSLNQNVIMKPVQFLL 373



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
 Frame = +3

Query: 51  VTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLGYDLEETIKPNVDCLL 230
           + +YP +LG  V   I P++ YL  +GI +  L    +    VL   +   ++P +  L 
Sbjct: 134 INEYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGEFVKSYPQVLHASVVVELQPVIKFLR 193

Query: 231 SFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDGFARVIEKMPQMVSLN 410
              + +  +  V+ +YP++LG  L+  +S+   +  + + + P     ++ + P ++ + 
Sbjct: 194 GLDVDKLDIGYVLQKYPELLGFKLEGTMSTSVAYL-VSIGVSPRDIGPMVTQYPYLLGMR 252

Query: 411 QSVIMKP-IEFLRGRTIPAEDVANMVVKCPQLV 506
              ++KP +++L    +P + VA M+ K P ++
Sbjct: 253 VGTMIKPLVDYLVSLGLPKKIVARMLEKRPYVL 285


>ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
            lyrata] gi|297327784|gb|EFH58204.1| hypothetical protein
            ARALYDRAFT_903808 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  439 bits (1129), Expect = e-121
 Identities = 207/287 (72%), Positives = 251/287 (87%)
 Frame = +3

Query: 3    AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVL 182
            AYLVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYL+S+G+PKKI+ARM EKRAY++
Sbjct: 222  AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRAYIV 281

Query: 183  GYDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPD 362
            GY+LEET+KPNVDCL+SFG+++E L  +IAQYPQILGLP+KAK+S+QQYFF+LKLKIDP+
Sbjct: 282  GYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPE 341

Query: 363  GFARVIEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVANMVVKCPQLVAQRVELMKNSYY 542
            GFARV+EKMPQ+VSL Q+VIMKPIEFL GR    ED+A MVV+CPQ++  RVELMKNSYY
Sbjct: 342  GFARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYY 401

Query: 543  FFKSEMKRSLQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQ 722
            F+K+EM R ++ELVE+PEYFTYSLESRIKPRYQ L SKG++ SL WFLNCSDQRFEERLQ
Sbjct: 402  FYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQ 461

Query: 723  ADYIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXXILYRRTVSL 863
             ++I+ ++ GP F +GGKLE+PG EIV           +LYRRT++L
Sbjct: 462  GNFIDPDTEGPMFDMGGKLEMPGGEIVSDEEEDESDDEVLYRRTLTL 508



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   YLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLG 185
           +L  +G++  DI     +YP +LG  V   + P++ YL  +GI +  L    +    VL 
Sbjct: 119 FLQKLGLTIDDIN----EYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLH 174

Query: 186 YDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDG 365
             +   + P V  L    + ++ L  V+ +YP++LG  L+  +S+   +  + + + P  
Sbjct: 175 ASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRD 233

Query: 366 FARVIEKMPQMVSLNQSVIMKP-IEFLRGRTIPAEDVANMVVKCPQLVAQRVE 521
              ++ + P ++ +    ++KP +++L    +P + VA M+ K   +V   +E
Sbjct: 234 IGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRAYIVGYNLE 286


>ref|NP_566005.1| transcription termination factor domain-containing protein
            [Arabidopsis thaliana] gi|3212859|gb|AAC23410.1|
            expressed protein [Arabidopsis thaliana]
            gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis
            thaliana] gi|19310761|gb|AAL85111.1| unknown protein
            [Arabidopsis thaliana] gi|330255268|gb|AEC10362.1|
            transcription termination factor domain-containing
            protein [Arabidopsis thaliana]
          Length = 507

 Score =  439 bits (1128), Expect = e-121
 Identities = 206/287 (71%), Positives = 252/287 (87%)
 Frame = +3

Query: 3    AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVL 182
            AYLVSIGVSPRDIGPMVTQYPYLLGMRVGT+IKP+VDYL+S+G+PKKI+ARM EKR+Y++
Sbjct: 221  AYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIV 280

Query: 183  GYDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPD 362
            GY+LEET+KPNVDCL+SFG+++E L  +IAQYPQILGLP+KAK+S+QQYFF+LKLKIDP+
Sbjct: 281  GYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPE 340

Query: 363  GFARVIEKMPQMVSLNQSVIMKPIEFLRGRTIPAEDVANMVVKCPQLVAQRVELMKNSYY 542
            GFARV+EKMPQ+VSL Q+VIMKPIEFL GR    ED+A MVV+CPQ++  RVELMKNSYY
Sbjct: 341  GFARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVELMKNSYY 400

Query: 543  FFKSEMKRSLQELVEFPEYFTYSLESRIKPRYQSLSSKGVKFSLAWFLNCSDQRFEERLQ 722
            F+K+EM R ++ELVE+PEYFTYSLESRIKPRYQ L SKG++ SL WFLNCSDQRFEERLQ
Sbjct: 401  FYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQ 460

Query: 723  ADYIETESAGPSFYVGGKLELPGSEIVXXXXXXXXXXXILYRRTVSL 863
             ++I+ ++ GP+F +GGKLE+PG EIV           +LYRRT++L
Sbjct: 461  GNFIDPDTEGPTFDMGGKLEMPGGEIVTDEEEDESDDEVLYRRTLTL 507



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 40/173 (23%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   YLVSIGVSPRDIGPMVTQYPYLLGMRVGTVIKPIVDYLVSLGIPKKILARMFEKRAYVLG 185
           +L  +G++  DI     +YP +LG  V   + P++ YL  +GI +  L    +    VL 
Sbjct: 118 FLQKLGLTIDDIN----EYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLH 173

Query: 186 YDLEETIKPNVDCLLSFGIRREALASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIDPDG 365
             +   + P V  L    + ++ L  V+ +YP++LG  L+  +S+   +  + + + P  
Sbjct: 174 ASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYL-VSIGVSPRD 232

Query: 366 FARVIEKMPQMVSLNQSVIMKP-IEFLRGRTIPAEDVANMVVKCPQLVAQRVE 521
              ++ + P ++ +    ++KP +++L    +P + VA M+ K   +V   +E
Sbjct: 233 IGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLE 285