BLASTX nr result

ID: Coptis24_contig00028921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028921
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   360   2e-97
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              360   2e-97
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   348   5e-94
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   343   2e-92
ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabido...   339   3e-91

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  360 bits (924), Expect = 2e-97
 Identities = 163/212 (76%), Positives = 191/212 (90%)
 Frame = +3

Query: 81  CCKHIAAYDLENWGNYTRYNFNAVVTEQDMQDTYQPPFQSCIQDAKASCLMCSYNAVNGV 260
           CCKH+ AYDLE WGN++RY+F+AVV+ QD++DTYQPPF+SC+Q  KASCLMCSYN VNGV
Sbjct: 225 CCKHLTAYDLEKWGNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGV 284

Query: 261 PSCAKKDLLDQARNEWGLTGYIVSDCDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGT 440
           P+CA++DL  +A+ EWG  GYI SDCDAVATVYEYQHYA SPEDAVADVLKAGTDINCG+
Sbjct: 285 PACARQDLFQKAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDINCGS 344

Query: 441 YMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPTKGKFGNLGPKDICTREHR 620
           YML +T+SA++QGKV+EEDIDRALFNLFSVQ+RLGLFDG+P  G +GNLGPKD+CT+EHR
Sbjct: 345 YMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMRLGLFDGDPANGLYGNLGPKDVCTKEHR 404

Query: 621 KLAQEAAKQGIVLLKNDKEFLPLQKKRISSLA 716
            LA EAA+QGIVLLKNDK+FLPL K RISSLA
Sbjct: 405 TLALEAARQGIVLLKNDKKFLPLDKSRISSLA 436


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  360 bits (924), Expect = 2e-97
 Identities = 163/212 (76%), Positives = 191/212 (90%)
 Frame = +3

Query: 81  CCKHIAAYDLENWGNYTRYNFNAVVTEQDMQDTYQPPFQSCIQDAKASCLMCSYNAVNGV 260
           CCKH+ AYDLE WGN++RY+F+AVV+ QD++DTYQPPF+SC+Q  KASCLMCSYN VNGV
Sbjct: 204 CCKHLTAYDLEKWGNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGV 263

Query: 261 PSCAKKDLLDQARNEWGLTGYIVSDCDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGT 440
           P+CA++DL  +A+ EWG  GYI SDCDAVATVYEYQHYA SPEDAVADVLKAGTDINCG+
Sbjct: 264 PACARQDLFQKAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDINCGS 323

Query: 441 YMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPTKGKFGNLGPKDICTREHR 620
           YML +T+SA++QGKV+EEDIDRALFNLFSVQ+RLGLFDG+P  G +GNLGPKD+CT+EHR
Sbjct: 324 YMLRHTQSAIDQGKVKEEDIDRALFNLFSVQMRLGLFDGDPANGLYGNLGPKDVCTKEHR 383

Query: 621 KLAQEAAKQGIVLLKNDKEFLPLQKKRISSLA 716
            LA EAA+QGIVLLKNDK+FLPL K RISSLA
Sbjct: 384 TLALEAARQGIVLLKNDKKFLPLDKSRISSLA 415


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  348 bits (894), Expect = 5e-94
 Identities = 161/212 (75%), Positives = 187/212 (88%)
 Frame = +3

Query: 81  CCKHIAAYDLENWGNYTRYNFNAVVTEQDMQDTYQPPFQSCIQDAKASCLMCSYNAVNGV 260
           CCKH  AYDLE WGN++RY+FNAVVTEQDM+DTYQPPF+SCIQ  KASCLMCSYN VNGV
Sbjct: 214 CCKHSTAYDLEKWGNFSRYSFNAVVTEQDMEDTYQPPFRSCIQKGKASCLMCSYNEVNGV 273

Query: 261 PSCAKKDLLDQARNEWGLTGYIVSDCDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGT 440
           P+CA++DLL + R EWG  GYI SDCDAVAT++EYQ+Y+KSPEDAVA  LKAG DINCGT
Sbjct: 274 PACAREDLLQKPRTEWGFKGYITSDCDAVATIFEYQNYSKSPEDAVAIALKAGMDINCGT 333

Query: 441 YMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPTKGKFGNLGPKDICTREHR 620
           Y+L N +SAVE+GK+QEEDIDRAL NLFSVQLRLGLFDG+P KG+FG LGPK++CT+EH+
Sbjct: 334 YVLRNAQSAVEKGKLQEEDIDRALHNLFSVQLRLGLFDGDPRKGQFGKLGPKNVCTKEHK 393

Query: 621 KLAQEAAKQGIVLLKNDKEFLPLQKKRISSLA 716
            LA EAA+QGIVLLKNDK+ LPL KK +SSLA
Sbjct: 394 TLALEAARQGIVLLKNDKKLLPLNKKAVSSLA 425


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  343 bits (880), Expect = 2e-92
 Identities = 159/212 (75%), Positives = 182/212 (85%)
 Frame = +3

Query: 81  CCKHIAAYDLENWGNYTRYNFNAVVTEQDMQDTYQPPFQSCIQDAKASCLMCSYNAVNGV 260
           CCKH  AYDLE WG ++RYNFNAVVT+QD++DTYQPPF+ C+Q  KASCLMCSYN VNGV
Sbjct: 215 CCKHFTAYDLEKWGEFSRYNFNAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGV 274

Query: 261 PSCAKKDLLDQARNEWGLTGYIVSDCDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGT 440
           P+CA KDLL   RN+WG  GYI SDCDAVATV+EYQ YAKS EDAVADVLKAG DINCGT
Sbjct: 275 PACASKDLLGLVRNKWGFEGYIASDCDAVATVFEYQKYAKSAEDAVADVLKAGMDINCGT 334

Query: 441 YMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPTKGKFGNLGPKDICTREHR 620
           +ML +T SA+EQG V+EED+DRALFNLFSVQ+RLGLF+G+P KGKFG LGP+D+CT EH+
Sbjct: 335 FMLRHTESAIEQGLVKEEDLDRALFNLFSVQMRLGLFNGDPEKGKFGKLGPQDVCTPEHK 394

Query: 621 KLAQEAAKQGIVLLKNDKEFLPLQKKRISSLA 716
           KLA EAA+QGIVLLKND +FLPL KK   SLA
Sbjct: 395 KLALEAARQGIVLLKNDNKFLPLDKKDRVSLA 426


>ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319302|gb|EFH49724.1| glycosyl hydrolase
           family 3 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 796

 Score =  339 bits (870), Expect = 3e-91
 Identities = 157/212 (74%), Positives = 181/212 (85%)
 Frame = +3

Query: 81  CCKHIAAYDLENWGNYTRYNFNAVVTEQDMQDTYQPPFQSCIQDAKASCLMCSYNAVNGV 260
           CCKH  AYDLE WGN+TRY+FNAVVTEQDM+DTYQPPF++CI+D KASCLMCSYNAVNGV
Sbjct: 227 CCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIKDGKASCLMCSYNAVNGV 286

Query: 261 PSCAKKDLLDQARNEWGLTGYIVSDCDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGT 440
           P+CA+ DLL +AR EWG  GYI SDCDAVAT++EYQ Y KSPE+AVAD +KAG DINCGT
Sbjct: 287 PACAQGDLLQKARVEWGFDGYITSDCDAVATIFEYQGYTKSPEEAVADAIKAGVDINCGT 346

Query: 441 YMLYNTRSAVEQGKVQEEDIDRALFNLFSVQLRLGLFDGNPTKGKFGNLGPKDICTREHR 620
           YML NT+SA+EQGKV EE +DRAL NLF+VQLRLGLFDG+P  G +G LG  DIC+ +HR
Sbjct: 347 YMLRNTQSAIEQGKVSEELVDRALLNLFAVQLRLGLFDGDPRGGHYGKLGSNDICSSDHR 406

Query: 621 KLAQEAAKQGIVLLKNDKEFLPLQKKRISSLA 716
           KLA EAA+QGIVLLKND + LPL K  +SSLA
Sbjct: 407 KLALEAARQGIVLLKNDYKLLPLNKNHVSSLA 438


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