BLASTX nr result

ID: Coptis24_contig00028909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028909
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280742.2| PREDICTED: cellulose synthase-like protein G...   135   6e-30
emb|CBI23576.3| unnamed protein product [Vitis vinifera]              135   6e-30
ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_002529320.1| cellulose synthase, putative [Ricinus commun...   131   9e-29
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    130   1e-28

>ref|XP_002280742.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 720

 Score =  135 bits (339), Expect = 6e-30
 Identities = 68/169 (40%), Positives = 98/169 (57%)
 Frame = +2

Query: 2    DPWFAIFAIVYMSYTIQHFVEVLSTGGSFKLFWNGQRTSFTVSAIPYLFACVDFFLKCIG 181
            D WF IF+ V+ S  ++H  +V STGGS + +WN +R     S   + +  +D  LK +G
Sbjct: 541  DSWFVIFSFVFFSSLLKHLKDVHSTGGSVQTWWNEERIWMMKSITSHFYGSLDGILKSVG 600

Query: 182  MKDIDFRPTNKSSMEDEIKKYHNGIFDFETDIKFVLIFTTIATLNVASFLVGLKRAITET 361
            M +  F PTNK+  +D++K Y  GIFDF T    +    T+   N+ S + G+ R +   
Sbjct: 601  MGEASFTPTNKAIQDDQVKLYQMGIFDFRTSTVLLAPLVTLVIFNMISLVGGVGRVMVAG 660

Query: 362  SYNKLFGQISLSFAIVAVYYPVLEAMALRKDKGSISTHVTVLTMGFLMV 508
              +KL GQI LSF IVAV YPV+E M LR+DKG I   V +L++   M+
Sbjct: 661  CCDKLLGQIFLSFFIVAVNYPVIEGMILRRDKGRIPPSVALLSLALSML 709


>emb|CBI23576.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  135 bits (339), Expect = 6e-30
 Identities = 68/169 (40%), Positives = 98/169 (57%)
 Frame = +2

Query: 2    DPWFAIFAIVYMSYTIQHFVEVLSTGGSFKLFWNGQRTSFTVSAIPYLFACVDFFLKCIG 181
            D WF IF+ V+ S  ++H  +V STGGS + +WN +R     S   + +  +D  LK +G
Sbjct: 583  DSWFVIFSFVFFSSLLKHLKDVHSTGGSVQTWWNEERIWMMKSITSHFYGSLDGILKSVG 642

Query: 182  MKDIDFRPTNKSSMEDEIKKYHNGIFDFETDIKFVLIFTTIATLNVASFLVGLKRAITET 361
            M +  F PTNK+  +D++K Y  GIFDF T    +    T+   N+ S + G+ R +   
Sbjct: 643  MGEASFTPTNKAIQDDQVKLYQMGIFDFRTSTVLLAPLVTLVIFNMISLVGGVGRVMVAG 702

Query: 362  SYNKLFGQISLSFAIVAVYYPVLEAMALRKDKGSISTHVTVLTMGFLMV 508
              +KL GQI LSF IVAV YPV+E M LR+DKG I   V +L++   M+
Sbjct: 703  CCDKLLGQIFLSFFIVAVNYPVIEGMILRRDKGRIPPSVALLSLALSML 751


>ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1|
            predicted protein [Populus trichocarpa]
          Length = 723

 Score =  131 bits (330), Expect = 7e-29
 Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
 Frame = +2

Query: 8    WFAIFAIVYMSYTIQHFVEVLSTGGSFKLFWNGQRTSFTVSAIPYLFACVDFFLKCIGMK 187
            WF +F+ ++++  ++H  E+LSTG S +   N QR     S   Y F  +D  +KC GM+
Sbjct: 546  WFMVFSFIFLASLLKHLEEILSTGASIQTLLNEQRVWMMKSVTAYTFGSLDAIMKCFGMR 605

Query: 188  DIDFRPTNKSSMEDEIKKYHNGIFDFETDIKFVLIFTTIATLNVASFLVGLKRAITETSY 367
            +  F PTNK + ++++  Y  G  +F+     +    T+  LN+ SF+ G+ R     S+
Sbjct: 606  EASFLPTNKVADDEQVALYQMGKLNFQASTMILTPIITLIILNIVSFIGGVARMFIAGSW 665

Query: 368  NKLFGQISLSFAIVAVYYPVLEAMALRKDKGSISTHVTVLTMG---FLMVLYHM 520
            N+ FGQ+ LS  I+ V YPV+E M LRKDKG + T VT+L++    FL+ L HM
Sbjct: 666  NETFGQVFLSLYILMVNYPVIEGMLLRKDKGRVPTPVTLLSLVITIFLLCLGHM 719


>ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis]
            gi|223531244|gb|EEF33089.1| cellulose synthase, putative
            [Ricinus communis]
          Length = 711

 Score =  131 bits (329), Expect = 9e-29
 Identities = 61/176 (34%), Positives = 102/176 (57%)
 Frame = +2

Query: 8    WFAIFAIVYMSYTIQHFVEVLSTGGSFKLFWNGQRTSFTVSAIPYLFACVDFFLKCIGMK 187
            WF IF+ ++++  ++H  EVLS+GG+ + +WN QR     S   Y F  +D  LKC+G++
Sbjct: 536  WFMIFSFIFLASFLKHLEEVLSSGGTVQTWWNEQRIWMIKSVTAYTFGSLDAILKCVGLR 595

Query: 188  DIDFRPTNKSSMEDEIKKYHNGIFDFETDIKFVLIFTTIATLNVASFLVGLKRAITETSY 367
               F PT K + E  +  Y  G F+F+T  + +    T+  LN+ S +VG+ R      +
Sbjct: 596  KASFIPTTKVADEGRVSLYQKGKFNFQTSTRLLAPIVTLVILNMVSLMVGVARMFIAGDW 655

Query: 368  NKLFGQISLSFAIVAVYYPVLEAMALRKDKGSISTHVTVLTMGFLMVLYHMFNLLL 535
            + +FGQ+ LS  IV V +PV+E M LRKD+GS+    ++L++   M   ++ ++ L
Sbjct: 656  SNMFGQVLLSLYIVVVNFPVIEGMLLRKDEGSVPFSTSLLSLVLCMTFLYLGSMTL 711


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  130 bits (328), Expect = 1e-28
 Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
 Frame = +2

Query: 8    WFAIFAIVYMSYTIQHFVEVLSTGGSFKLFWNGQRTSFTVSAIPYLFACVDFFLKCIGMK 187
            WF +F+ ++++  ++H  E+LSTG S +   N QR     S   Y F  +D  +KC GM+
Sbjct: 546  WFMVFSFIFLASLLKHLEEILSTGASIQTLLNEQRVWMMKSVTAYTFGSLDAIMKCFGMR 605

Query: 188  DIDFRPTNKSSMEDEIKKYHNGIFDFETDIKFVLIFTTIATLNVASFLVGLKRAITETSY 367
            +  F PTNK + ++++  Y  G  +F+     +    T+  LN+ SF+ G+ R     S+
Sbjct: 606  EASFLPTNKVADDEQVALYQMGKLNFQASTTILTPIITLIILNMVSFIGGVARMFIAGSW 665

Query: 368  NKLFGQISLSFAIVAVYYPVLEAMALRKDKGSISTHVTVLTMG---FLMVLYHM 520
            N+ FGQ+ LS  I+ V YPV+E M LRKDKG + T VT+L++    FL+ L HM
Sbjct: 666  NETFGQVFLSLYILMVNYPVIEGMLLRKDKGRVPTPVTLLSLVITIFLLCLGHM 719


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