BLASTX nr result

ID: Coptis24_contig00028908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028908
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum] gi|3...   196   2e-48
gb|AEN70810.1| endo-1,4-beta-glucanase [Gossypium hirsutum subsp...   196   2e-48
gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri] gi|34...   196   2e-48
gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]      196   2e-48
gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossyp...   196   2e-48

>gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|324984021|gb|ADY68793.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium raimondii]
           gi|324984025|gb|ADY68795.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|345103947|gb|AEN70795.1| endo-1,4-beta-glucanase
           [Gossypium thurberi] gi|345103949|gb|AEN70796.1|
           endo-1,4-beta-glucanase [Gossypium laxum]
           gi|345103957|gb|AEN70800.1| endo-1,4-beta-glucanase
           [Gossypium mustelinum] gi|345103983|gb|AEN70813.1|
           endo-1,4-beta-glucanase [Gossypium davidsonii]
           gi|345103985|gb|AEN70814.1| endo-1,4-beta-glucanase
           [Gossypium klotzschianum] gi|345103987|gb|AEN70815.1|
           endo-1,4-beta-glucanase [Gossypium aridum]
           gi|345103991|gb|AEN70817.1| endo-1,4-beta-glucanase
           [Gossypium lobatum] gi|345103993|gb|AEN70818.1|
           endo-1,4-beta-glucanase [Gossypium trilobum]
          Length = 619

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561 QVGVGDTSGGATTPNDHYCWVRPEDIDYQRPVYECHSCPDXXXXXXXXXXXASIVFKDSK 382
           QVG+GDTSGG++ PNDHYCW+RPEDIDY RPVYECHSC D           ASIVFKD+K
Sbjct: 229 QVGIGDTSGGSSAPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALASASIVFKDNK 288

Query: 381 TYSQKLVHGAERLFAFAWEACHQKTCNPSSDP-----ESGVWDEILWASSWLFFATGRPK 217
            YSQKLVHGA  LF FA +   + +    SDP      S  WDE +W  +WL++ATG   
Sbjct: 289 AYSQKLVHGARTLFKFARDQRGRYSAG-GSDPALFYNSSSYWDEFVWGGAWLYYATGNSS 347

Query: 216 YLTHATDRYSALRAGLTLGLQSC-VPRWDKKFPFVQVLLTRLRLFLGPGHPAEEILFKLH 40
           YL  AT    A  AG   G     V  WD K    QVLL+RLRLFL PG+P EEIL   H
Sbjct: 348 YLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILSTFH 407

Query: 39  RSSERMMCSYLPV 1
             +  +MCS+LPV
Sbjct: 408 NQTSIIMCSFLPV 420


>gb|AEN70810.1| endo-1,4-beta-glucanase [Gossypium hirsutum subsp. latifolium]
          Length = 619

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561 QVGVGDTSGGATTPNDHYCWVRPEDIDYQRPVYECHSCPDXXXXXXXXXXXASIVFKDSK 382
           QVG+GDTSGG++ PNDHYCW+RPEDIDY RPVYECHSC D           ASIVFKD+K
Sbjct: 229 QVGIGDTSGGSSAPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALASASIVFKDNK 288

Query: 381 TYSQKLVHGAERLFAFAWEACHQKTCNPSSDP-----ESGVWDEILWASSWLFFATGRPK 217
            YSQKLVHGA  LF FA +   + +    SDP      S  WDE +W  +WL++ATG   
Sbjct: 289 AYSQKLVHGARTLFKFARDQRGRYSAG-GSDPALFYNSSSYWDEFVWGGAWLYYATGNSS 347

Query: 216 YLTHATDRYSALRAGLTLGLQSC-VPRWDKKFPFVQVLLTRLRLFLGPGHPAEEILFKLH 40
           YL  AT    A  AG   G     V  WD K    QVLL+RLRLFL PG+P EEIL   H
Sbjct: 348 YLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILSTFH 407

Query: 39  RSSERMMCSYLPV 1
             +  +MCS+LPV
Sbjct: 408 NQTSIIMCSFLPV 420


>gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri]
           gi|345103979|gb|AEN70811.1| endo-1,4-beta-glucanase
           [Gossypium armourianum] gi|345103981|gb|AEN70812.1|
           endo-1,4-beta-glucanase [Gossypium harknessii]
          Length = 619

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561 QVGVGDTSGGATTPNDHYCWVRPEDIDYQRPVYECHSCPDXXXXXXXXXXXASIVFKDSK 382
           QVG+GDTSGG++ PNDHYCW+RPEDIDY RPVYECHSC D           ASIVFKD+K
Sbjct: 229 QVGIGDTSGGSSAPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALASASIVFKDNK 288

Query: 381 TYSQKLVHGAERLFAFAWEACHQKTCNPSSDP-----ESGVWDEILWASSWLFFATGRPK 217
            YSQKLVHGA  LF FA +   + +    SDP      S  WDE +W  +WL++ATG   
Sbjct: 289 AYSQKLVHGARTLFKFARDQRGRYSAG-GSDPALFYNSSSYWDEFVWGGAWLYYATGNSS 347

Query: 216 YLTHATDRYSALRAGLTLGLQSC-VPRWDKKFPFVQVLLTRLRLFLGPGHPAEEILFKLH 40
           YL  AT    A  AG   G     V  WD K    QVLL+RLRLFL PG+P EEIL   H
Sbjct: 348 YLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILSTFH 407

Query: 39  RSSERMMCSYLPV 1
             +  +MCS+LPV
Sbjct: 408 NQTSIIMCSFLPV 420


>gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]
          Length = 619

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561 QVGVGDTSGGATTPNDHYCWVRPEDIDYQRPVYECHSCPDXXXXXXXXXXXASIVFKDSK 382
           QVG+GDTSGG++ PNDHYCW+RPEDIDY RPVYECHSC D           ASIVFKD+K
Sbjct: 229 QVGIGDTSGGSSAPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALASASIVFKDNK 288

Query: 381 TYSQKLVHGAERLFAFAWEACHQKTCNPSSDP-----ESGVWDEILWASSWLFFATGRPK 217
            YSQKLVHGA  LF FA +   + +    SDP      S  WDE +W  +WL++ATG   
Sbjct: 289 AYSQKLVHGARTLFKFARDQRGRYSAG-GSDPALFYNSSSYWDEFVWGGAWLYYATGNSS 347

Query: 216 YLTHATDRYSALRAGLTLGLQSC-VPRWDKKFPFVQVLLTRLRLFLGPGHPAEEILFKLH 40
           YL  AT    A  AG   G     V  WD K    QVLL+RLRLFL PG+P EEIL   H
Sbjct: 348 YLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILSTFH 407

Query: 39  RSSERMMCSYLPV 1
             +  +MCS+LPV
Sbjct: 408 NQTSIIMCSFLPV 420


>gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossypium barbadense]
           gi|345103961|gb|AEN70802.1| endo-1,4-beta-glucanase
           [Gossypium darwinii] gi|345103963|gb|AEN70803.1|
           endo-1,4-beta-glucanase [Gossypium tomentosum]
           gi|345103965|gb|AEN70804.1| endo-1,4-beta-glucanase
           [Gossypium tomentosum] gi|345103969|gb|AEN70806.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           brasiliense] gi|345103973|gb|AEN70808.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           peruvianum]
          Length = 619

 Score =  196 bits (498), Expect = 2e-48
 Identities = 103/193 (53%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561 QVGVGDTSGGATTPNDHYCWVRPEDIDYQRPVYECHSCPDXXXXXXXXXXXASIVFKDSK 382
           QVG+GDTSGG++ PNDHYCW+RPEDIDY RPVYECHSC D           ASIVFKD+K
Sbjct: 229 QVGIGDTSGGSSAPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALASASIVFKDNK 288

Query: 381 TYSQKLVHGAERLFAFAWEACHQKTCNPSSDP-----ESGVWDEILWASSWLFFATGRPK 217
            YSQKLVHGA  LF FA +   + +    SDP      S  WDE +W  +WL++ATG   
Sbjct: 289 AYSQKLVHGARTLFKFARDQRGRYSAG-GSDPALFYNSSSYWDEFVWGGAWLYYATGNSS 347

Query: 216 YLTHATDRYSALRAGLTLGLQSC-VPRWDKKFPFVQVLLTRLRLFLGPGHPAEEILFKLH 40
           YL  AT    A  AG   G     V  WD K    QVLL+RLRLFL PG+P EEIL   H
Sbjct: 348 YLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILSTFH 407

Query: 39  RSSERMMCSYLPV 1
             +  +MCS+LPV
Sbjct: 408 NQTSIIMCSFLPV 420


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