BLASTX nr result

ID: Coptis24_contig00028907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028907
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262781.1| PREDICTED: chaperone protein dnaJ 20, chloro...    79   3e-13
ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...    75   5e-12
gb|AFK36504.1| unknown [Lotus japonicus]                               71   1e-10

>ref|XP_002262781.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Vitis
           vinifera]
          Length = 168

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
 Frame = +2

Query: 80  MDMSLSSRFNGSKLLIHPSHQSQSILESRKSITVS---RRATMLAREKHSTNYYEVLSLH 250
           MD+SL+SR N  K    P  +       R+ ++VS   R A  LA    S NYY++L L 
Sbjct: 1   MDISLTSRLNTVK---PPIIRRPLADNHRRFVSVSCSARSAARLACGNESPNYYKLLHLS 57

Query: 251 ADQNVSVSEIKKAYRAKALQYHPDVCHTSGRDESVRMFVEVHKAYQT 391
            D N  V EIK+AYR  +LQYHPDVC  S ++ES RMFV+++ AY+T
Sbjct: 58  PD-NAGVDEIKRAYRRMSLQYHPDVCDPSMKEESTRMFVQLNAAYKT 103


>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 80  MDMSLS-SRFNGSKLLIHPSHQSQSILESRKSITVSRRATMLAREKHSTNYYEVLSLHAD 256
           M+MSL  S    +KL I     S+      ++I + + AT     +   N+YEVLSL   
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTI-LCKTATNEVAFRKKMNFYEVLSL-GS 58

Query: 257 QNVSVSEIKKAYRAKALQYHPDVCHTSGRDESVRMFVEVHKAYQT 391
           QNV   EIKKAYR+ ALQYHPDVC  S ++ES + FVE+ KAY+T
Sbjct: 59  QNVGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYET 103


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 80  MDMSLS-SRFNGSKLLIHPSHQSQSILESRKSITVSRRATMLAREKHSTNYYEVLSLHAD 256
           M+MSL  S    +KL I     S+      ++I + + AT     +   N+YEVLSL   
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTI-LCKTATNEVAFRKKMNFYEVLSL-GS 58

Query: 257 QNVSVSEIKKAYRAKALQYHPDVCHTSGRDESVRMFVEVHKAYQT 391
           QNV   EIKKAYR+ ALQYHPDVC  S ++ES + FVE+ KAY+T
Sbjct: 59  QNVGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYET 103


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 167 KSITVSRRATMLAREKHSTNYYEVLSLHADQNVSVSEIKKAYRAKALQYHPDVCHTSGRD 346
           ++IT S R   + +EK  TN+YEVLSL + +NV   EI+KAYR+ ALQ+HPDVC  S ++
Sbjct: 33  RTITCSYR---IMQEK-KTNFYEVLSLQS-KNVGFDEIRKAYRSMALQFHPDVCRLSAKE 87

Query: 347 ESVRMFVEVHKAYQT 391
           ES + FVE+ KAY+T
Sbjct: 88  ESTKRFVELQKAYET 102


>gb|AFK36504.1| unknown [Lotus japonicus]
          Length = 172

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = +2

Query: 86  MSLSSRFNGSKLLIHPSHQSQSILESRKSITVS-RRATMLAREKHSTNYYEVLSLHADQN 262
           +SLSS  + +K L    H S+    ++ +  +S R AT L  E    N Y+VLSL     
Sbjct: 4   LSLSSSLSIAKPLHSFPHSSKQQRTTQVNFAISCRGATKLKEETTHGNLYKVLSLKPGS- 62

Query: 263 VSVSEIKKAYRAKALQYHPDVCH-TSGRDESVRMFVEVHKAYQ 388
            ++ EIK+AYR+ ALQYHPDVCH  S ++ES +MFV++++AY+
Sbjct: 63  -AMDEIKRAYRSMALQYHPDVCHDPSMKEESTKMFVQLNEAYK 104


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