BLASTX nr result

ID: Coptis24_contig00028904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028904
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
emb|CAN82768.1| hypothetical protein VITISV_037881 [Vitis vinifera]    67   2e-09
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    66   3e-09
emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]    66   3e-09
emb|CAN74087.1| hypothetical protein VITISV_002101 [Vitis vinifera]    66   3e-09

>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
 Frame = +3

Query: 33  VWGS-ASHVLTEKLKICQQKLKWWNKNIFGHLDVVIKRSAY*LENILDKIASLPNPPDAL 209
           VW S  S  LT+KLK  +++LK WN + FGH+D  I+     LE+ +  +  + N  D  
Sbjct: 258 VWASHTSGNLTDKLKETKKRLKIWNSSEFGHIDRNIEE----LEDRIHNLDLISNGRDLQ 313

Query: 210 FQEEL*YKEEHQKL---LRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRSHKSNI 371
            +E    +    +L   LR+KE  WA+ S   W  +G+ NT YFHT+ + R  K+ I
Sbjct: 314 LEELAERRSSQMELWVWLRRKEAFWAQNSRAKWIKEGDKNTKYFHTLASTRKKKNTI 370


>emb|CAN82768.1| hypothetical protein VITISV_037881 [Vitis vinifera]
          Length = 1650

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = +3

Query: 39  GSASHVLTEKLKICQQKLKWWNKNIFGHLDVVIKRSAY*LENILDKIASLPNPPDALFQE 218
           GSAS +L EKLK+ + KLK WNK++FG ++ +   +   +E + DK        + L  E
Sbjct: 306 GSASFILAEKLKVVKSKLKEWNKDVFGKIEYMKNLALDQMEFVDDK-----EKTNRLSLE 360

Query: 219 EL*YK----EEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRSHKSN 368
           E+  +    EE++K +  +E  W +KS ++W  +G+ NT +FH +      ++N
Sbjct: 361 EMEARRETMEEYKKWILLEENTWRQKSKKVWLKEGDRNTGFFHKMANAHRRRNN 414


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
 Frame = +3

Query: 39  GSASHVLTEKLKICQQKLKWWNKNIFGHLDVVIKRSAY*LENIL-----DKIASLPNPPD 203
           GSAS VL EK+K+ + KLK WN+  FG +++   R    LE +      +KI+ L N  +
Sbjct: 23  GSASFVLAEKIKVLKAKLKEWNRESFGRIEL---RKNVALEQVQFWDAREKISRL-NLEE 78

Query: 204 ALFQEEL*YKEEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRSHKSNIVR 377
              ++E   +E+++K +  +EI W +KS ++W  +G+ NT YFH +      ++N+ R
Sbjct: 79  LEARKEA--REDYKKWVLFEEISWRQKSREVWLKEGDRNTGYFHKMANAHRRRNNVDR 134


>emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera]
          Length = 1177

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
 Frame = +3

Query: 39  GSASHVLTEKLKICQQKLKWWNKNIFGHLDVVIKRSAY*LENIL-----DKIASLPNPPD 203
           GS S +L EK+K+ + KLK WN++ FG +++   R    LE +      +KI+ L N  +
Sbjct: 125 GSTSFILAEKIKVLKVKLKEWNRDSFGRIEL---RKNAALEQVQFWDAREKISRL-NLEE 180

Query: 204 ALFQEEL*YKEEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTRRSHKSNIVR 377
              ++E   +E+++K +  +EI W +KS ++W  +G+ NT YFH +V     ++N+ R
Sbjct: 181 LEARKEA--REDYKKWVLLEEISWRQKSREVWLKEGDRNTGYFHKMVNAHRRRNNVDR 236


>emb|CAN74087.1| hypothetical protein VITISV_002101 [Vitis vinifera]
          Length = 1071

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   EAIAEAWQP-PVWGSASHVLTEKLKICQQKLKWWNKNIFGHLDVVIKRSAY*LENILDK- 176
           E + + W+   V GS S +LTEKLK  +  L+ WNK +FG +D   K++A+ L +  DK 
Sbjct: 576 EVLRQWWEGIQVSGSTSFILTEKLKALKPFLRSWNKEVFGQIDSE-KQNAWNLIDYWDKK 634

Query: 177 --IASLPNPPDALFQEEL*YKEEHQKLLRQKEILWAEKSGQMWFIQGELNTTYFHTVVTR 350
             + SL    +   +E    +E ++K    +E LW +KS ++W  +G+ NT +FH +   
Sbjct: 635 ERVRSLSMEEEEARKEA---RELYKKWTLLEEXLWRQKSREIWLKEGDRNTKFFHKMANA 691

Query: 351 RSHKSNIVR 377
            + ++ + R
Sbjct: 692 HNRRNQLNR 700


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