BLASTX nr result

ID: Coptis24_contig00028890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028890
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      126   2e-27
emb|CBI40278.3| unnamed protein product [Vitis vinifera]              126   2e-27
emb|CBI33773.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           124   8e-27
emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   124   8e-27

>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -1

Query: 211 TIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFL*QCERLLLSIIADSRF 32
           TIQRMELLVLSTL WKMNPVTP+SF+DHIIRRLGLK HLHWEFL  CER LLS++ADSRF
Sbjct: 191 TIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRF 250

Query: 31  VRYLPSELAT 2
           VRYLPS LAT
Sbjct: 251 VRYLPSVLAT 260


>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -1

Query: 211 TIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFL*QCERLLLSIIADSRF 32
           TIQRMELLVLSTL WKMNPVTP+SF+DHIIRRLGLK HLHWEFL  CER LLS++ADSRF
Sbjct: 179 TIQRMELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRF 238

Query: 31  VRYLPSELAT 2
           VRYLPS LAT
Sbjct: 239 VRYLPSVLAT 248


>emb|CBI33773.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -1

Query: 211 TIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFL*QCERLLLSIIADSRF 32
           TIQRMELLVLS+L WKMNPVTPISF DHIIRRLGLK HLHWEFL +CERLLLS+IADSRF
Sbjct: 116 TIQRMELLVLSSLQWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRF 175

Query: 31  VRYLPSELAT 2
           + YLPS LAT
Sbjct: 176 LCYLPSTLAT 185


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -1

Query: 211 TIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFL*QCERLLLSIIADSRF 32
           TIQRMELLVLS+L WKMNPVTPISF DHIIRRLGLK HLHWEFL +CERLLLS+IADSRF
Sbjct: 179 TIQRMELLVLSSLQWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRF 238

Query: 31  VRYLPSELAT 2
           + YLPS LAT
Sbjct: 239 LCYLPSTLAT 248


>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = -1

Query: 211 TIQRMELLVLSTLHWKMNPVTPISFLDHIIRRLGLKNHLHWEFL*QCERLLLSIIADSRF 32
           TIQRMELLVLS+L WKMNPVTPISF DHIIRRLGLK HLHWEFL +CERLLLS+IADSRF
Sbjct: 179 TIQRMELLVLSSLQWKMNPVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRF 238

Query: 31  VRYLPSELAT 2
           + YLPS LAT
Sbjct: 239 LCYLPSTLAT 248


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