BLASTX nr result

ID: Coptis24_contig00028863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028863
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|222866766|gb|EEF03897.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = +2

Query: 125 KCNGCGMQLVVPPEARTMRCPWCQAVTPVKPYDPYGRTEDPVRQAATWMKGLLSNVSNKI 304
           KC+ CG+QLVVPP+A+ +RC  CQAVT V  Y P  +  +    A     GL+S VS+ I
Sbjct: 5   KCSRCGVQLVVPPDAQAIRCAVCQAVTRVHSYYPLAQARE---SAGRITSGLISMVSSNI 61

Query: 305 DTIATQINS 331
            T+ + ++S
Sbjct: 62  TTMTSSVSS 70


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