BLASTX nr result
ID: Coptis24_contig00028852
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028852 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW74308.1| hypothetical protein ZEAMMB73_966616, partial [Ze... 94 4e-28 ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g... 101 8e-28 gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon... 101 8e-28 gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa... 101 8e-28 gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa... 101 8e-28 >gb|AFW74308.1| hypothetical protein ZEAMMB73_966616, partial [Zea mays] Length = 667 Score = 94.0 bits (232), Expect(2) = 4e-28 Identities = 42/71 (59%), Positives = 55/71 (77%) Frame = +1 Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285 DRP+L R+FH+K +ELK L K+ +LGKV AY++V+EFQKRGLPHAHFLLI+ + KL Sbjct: 500 DRPDLVVRVFHAKLQELKHRLTKQDILGKVRAYIYVVEFQKRGLPHAHFLLIMQRKYKLT 559 Query: 286 SPEHYDQVVRA 318 PE YD ++ A Sbjct: 560 CPEQYDLLISA 570 Score = 55.8 bits (133), Expect(2) = 4e-28 Identities = 22/33 (66%), Positives = 28/33 (84%) Frame = +2 Query: 2 QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100 +KFGKLD+F+T+TCNPNW EIR+ELLP Q + Sbjct: 468 RKFGKLDIFLTMTCNPNWDEIRRELLPDQTPQD 500 >ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa Japonica Group] Length = 1575 Score = 101 bits (252), Expect(2) = 8e-28 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = +1 Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285 DRP+L R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D KL Sbjct: 642 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 701 Query: 286 SPEHYDQVVRA 318 SPE YD ++ A Sbjct: 702 SPEQYDCIISA 712 Score = 47.0 bits (110), Expect(2) = 8e-28 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +2 Query: 2 QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100 QK+GK D+F+T+TCNPNW EI L PGQ + Sbjct: 610 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 642 >gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group] Length = 1443 Score = 101 bits (252), Expect(2) = 8e-28 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = +1 Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285 DRP+L R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D KL Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542 Query: 286 SPEHYDQVVRA 318 SPE YD ++ A Sbjct: 543 SPEQYDCIISA 553 Score = 47.0 bits (110), Expect(2) = 8e-28 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +2 Query: 2 QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100 QK+GK D+F+T+TCNPNW EI L PGQ + Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483 >gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa Japonica Group] Length = 1416 Score = 101 bits (252), Expect(2) = 8e-28 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = +1 Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285 DRP+L R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D KL Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542 Query: 286 SPEHYDQVVRA 318 SPE YD ++ A Sbjct: 543 SPEQYDCIISA 553 Score = 47.0 bits (110), Expect(2) = 8e-28 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +2 Query: 2 QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100 QK+GK D+F+T+TCNPNW EI L PGQ + Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483 >gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa Japonica Group] Length = 1416 Score = 101 bits (252), Expect(2) = 8e-28 Identities = 45/71 (63%), Positives = 57/71 (80%) Frame = +1 Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285 DRP+L R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D KL Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542 Query: 286 SPEHYDQVVRA 318 SPE YD ++ A Sbjct: 543 SPEQYDCIISA 553 Score = 47.0 bits (110), Expect(2) = 8e-28 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +2 Query: 2 QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100 QK+GK D+F+T+TCNPNW EI L PGQ + Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483