BLASTX nr result

ID: Coptis24_contig00028852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028852
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW74308.1| hypothetical protein ZEAMMB73_966616, partial [Ze...    94   4e-28
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...   101   8e-28
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...   101   8e-28
gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa...   101   8e-28
gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa...   101   8e-28

>gb|AFW74308.1| hypothetical protein ZEAMMB73_966616, partial [Zea mays]
          Length = 667

 Score = 94.0 bits (232), Expect(2) = 4e-28
 Identities = 42/71 (59%), Positives = 55/71 (77%)
 Frame = +1

Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285
           DRP+L  R+FH+K +ELK  L K+ +LGKV AY++V+EFQKRGLPHAHFLLI+ +  KL 
Sbjct: 500 DRPDLVVRVFHAKLQELKHRLTKQDILGKVRAYIYVVEFQKRGLPHAHFLLIMQRKYKLT 559

Query: 286 SPEHYDQVVRA 318
            PE YD ++ A
Sbjct: 560 CPEQYDLLISA 570



 Score = 55.8 bits (133), Expect(2) = 4e-28
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +2

Query: 2   QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100
           +KFGKLD+F+T+TCNPNW EIR+ELLP Q   +
Sbjct: 468 RKFGKLDIFLTMTCNPNWDEIRRELLPDQTPQD 500


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
           gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
           Japonica Group]
          Length = 1575

 Score =  101 bits (252), Expect(2) = 8e-28
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = +1

Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285
           DRP+L  R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D   KL 
Sbjct: 642 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 701

Query: 286 SPEHYDQVVRA 318
           SPE YD ++ A
Sbjct: 702 SPEQYDCIISA 712



 Score = 47.0 bits (110), Expect(2) = 8e-28
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100
           QK+GK D+F+T+TCNPNW EI   L PGQ   +
Sbjct: 610 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 642


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score =  101 bits (252), Expect(2) = 8e-28
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = +1

Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285
           DRP+L  R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D   KL 
Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542

Query: 286 SPEHYDQVVRA 318
           SPE YD ++ A
Sbjct: 543 SPEQYDCIISA 553



 Score = 47.0 bits (110), Expect(2) = 8e-28
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100
           QK+GK D+F+T+TCNPNW EI   L PGQ   +
Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483


>gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa Japonica Group]
          Length = 1416

 Score =  101 bits (252), Expect(2) = 8e-28
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = +1

Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285
           DRP+L  R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D   KL 
Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542

Query: 286 SPEHYDQVVRA 318
           SPE YD ++ A
Sbjct: 543 SPEQYDCIISA 553



 Score = 47.0 bits (110), Expect(2) = 8e-28
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100
           QK+GK D+F+T+TCNPNW EI   L PGQ   +
Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483


>gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa Japonica Group]
          Length = 1416

 Score =  101 bits (252), Expect(2) = 8e-28
 Identities = 45/71 (63%), Positives = 57/71 (80%)
 Frame = +1

Query: 106 DRPELTTRIFHSKCEELKKDLFKKHVLGKVLAYVHVIEFQKRGLPHAHFLLILDQSDKLR 285
           DRP+L  R+F +K E+LKK L +KH+LGKV+AY +V+EFQKRGLPHAHFLLI+D   KL 
Sbjct: 483 DRPDLIVRVFRAKLEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLT 542

Query: 286 SPEHYDQVVRA 318
           SPE YD ++ A
Sbjct: 543 SPEQYDCIISA 553



 Score = 47.0 bits (110), Expect(2) = 8e-28
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   QKFGKLDLFITITCNPNWPEIRKELLPGQVASE 100
           QK+GK D+F+T+TCNPNW EI   L PGQ   +
Sbjct: 451 QKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQD 483


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