BLASTX nr result

ID: Coptis24_contig00028835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028835
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis ...   226   1e-57
emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]   226   1e-57
gb|ADL36818.1| SCL domain class transcription factor [Malus x do...   223   1e-56
ref|XP_002525254.1| transcription factor, putative [Ricinus comm...   220   8e-56
ref|XP_002304316.1| GRAS family transcription factor [Populus tr...   218   4e-55

>ref|XP_002279517.2| PREDICTED: scarecrow-like protein 32 [Vitis vinifera]
          Length = 454

 Score =  226 bits (577), Expect = 1e-57
 Identities = 107/126 (84%), Positives = 119/126 (94%)
 Frame = -1

Query: 378 ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAGKTG 199
           ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARA  +G
Sbjct: 48  ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAANSG 107

Query: 198 SCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGYSSVHI 19
           +CK+ TAMAN++ NL+I+THKFSVIELASF+DLTPWHRFGF+AANAAILE +EGYS +HI
Sbjct: 108 TCKMFTAMANAHANLAINTHKFSVIELASFVDLTPWHRFGFAAANAAILEVVEGYSVIHI 167

Query: 18  IDLSST 1
           +DLS T
Sbjct: 168 VDLSLT 173


>emb|CAN62656.1| hypothetical protein VITISV_023403 [Vitis vinifera]
          Length = 455

 Score =  226 bits (577), Expect = 1e-57
 Identities = 107/126 (84%), Positives = 119/126 (94%)
 Frame = -1

Query: 378 ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAGKTG 199
           ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARA  +G
Sbjct: 49  ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAANSG 108

Query: 198 SCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGYSSVHI 19
           +CK+ TAMAN++ NL+I+THKFSVIELASF+DLTPWHRFGF+AANAAILE +EGYS +HI
Sbjct: 109 TCKMFTAMANAHANLAINTHKFSVIELASFVDLTPWHRFGFAAANAAILEVVEGYSVIHI 168

Query: 18  IDLSST 1
           +DLS T
Sbjct: 169 VDLSLT 174


>gb|ADL36818.1| SCL domain class transcription factor [Malus x domestica]
          Length = 450

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/126 (85%), Positives = 115/126 (91%)
 Frame = -1

Query: 378 ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAGKTG 199
           ANCMEQLLVHCANAIE+NDATL QQILWVLNNIAP DGDSNQRLTC FLRALIARA + G
Sbjct: 29  ANCMEQLLVHCANAIETNDATLTQQILWVLNNIAPQDGDSNQRLTCAFLRALIARAARIG 88

Query: 198 SCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGYSSVHI 19
           SCK+L AMANS  N +IHTHKFSVIELASFIDLTPWHRFGF+AANAAILEA+EGYS VHI
Sbjct: 89  SCKVLAAMANSQANFTIHTHKFSVIELASFIDLTPWHRFGFTAANAAILEAVEGYSVVHI 148

Query: 18  IDLSST 1
           +DLS T
Sbjct: 149 VDLSLT 154


>ref|XP_002525254.1| transcription factor, putative [Ricinus communis]
           gi|223535412|gb|EEF37082.1| transcription factor,
           putative [Ricinus communis]
          Length = 440

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/126 (84%), Positives = 117/126 (92%)
 Frame = -1

Query: 378 ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAGKTG 199
           ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTC FLRALIARA K+G
Sbjct: 29  ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAKSG 88

Query: 198 SCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGYSSVHI 19
           +CKLL AMAN++  L+I  HKFSVIELASF+DLTPWHRFGF+AANA+ILEAIEG+S VHI
Sbjct: 89  TCKLLAAMANAHCTLAIDAHKFSVIELASFVDLTPWHRFGFTAANASILEAIEGFSVVHI 148

Query: 18  IDLSST 1
           +DLS T
Sbjct: 149 VDLSLT 154


>ref|XP_002304316.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841748|gb|EEE79295.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 451

 Score =  218 bits (555), Expect = 4e-55
 Identities = 103/126 (81%), Positives = 116/126 (92%)
 Frame = -1

Query: 378 ANCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIARAGKTG 199
           ANCMEQLLVHC NAIESNDATL+QQILWVLNNIAPPDGDSNQRLTC FLRALIARA K+G
Sbjct: 44  ANCMEQLLVHCVNAIESNDATLSQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAKSG 103

Query: 198 SCKLLTAMANSNPNLSIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGYSSVHI 19
           +CKLL AM N++ NL+I THKFS+IELASF+DLTPWHRFG++AANAAILEA+EGY  +HI
Sbjct: 104 TCKLLAAMENAHCNLAIDTHKFSIIELASFVDLTPWHRFGYTAANAAILEAVEGYLVIHI 163

Query: 18  IDLSST 1
           +DLS T
Sbjct: 164 VDLSLT 169


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