BLASTX nr result

ID: Coptis24_contig00028820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028820
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH81294.1| telomerase reverse transcriptase [Populus trichoc...    87   1e-15
gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]        75   7e-12
gb|AAX19874.1| telomerase reverse transcriptase catalytic subuni...    71   8e-11
gb|AAX19886.1| telomerase reverse transcriptase catalytic subuni...    71   8e-11
gb|AAS91217.1| telomerase reverse transcriptase catalytic subuni...    71   8e-11

>gb|ACH81294.1| telomerase reverse transcriptase [Populus trichocarpa]
          Length = 1128

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -3

Query: 269 KFVHLRKFENFSLKQCMYGLKTSCVPLLSNWYSSCYMNNH----APETGEKLINDYQKFS 102
           KF+ LRKFE FSLKQCM+ LKTS  P LS+ + SC+++ H     P     L  D  K++
Sbjct: 458 KFIWLRKFEKFSLKQCMHKLKTSGFPFLSDKHCSCFLDTHMLNNMPGHTAGLHKDLYKWN 517

Query: 101 EVMAILKNNLFSYWIYWLFSRLVVPIVQSSFYV 3
                LK+ L   WIYW FS LVVP+VQ++FYV
Sbjct: 518 GAANDLKHLLVQKWIYWFFSSLVVPLVQANFYV 550


>gb|ACG63772.1| telomerase reverse transcriptase [Carica papaya]
          Length = 1204

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 KFVHLRKFENFSLKQCMYGLKTSCVPLLSNWYSSCYMNNHAPETGEKL--INDYQKFSEV 96
           +FV LR+FE FS+KQC++ LKTS    LS   SS YM      +G+ +    +  K +  
Sbjct: 505 RFVGLRRFEKFSIKQCLHKLKTSRFAFLSKNNSSSYMMQEGL-SGQSINKCKNLDKLNNA 563

Query: 95  MAILKNNLFSYWIYWLFSRLVVPIVQSSFYV 3
           +  +KN L   WI+WLFS LV+P+VQ++FYV
Sbjct: 564 VRNMKNKLLMNWIFWLFSCLVMPLVQANFYV 594


>gb|AAX19874.1| telomerase reverse transcriptase catalytic subunit [Doryanthes
           excelsa]
          Length = 248

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -3

Query: 269 KFVHLRKFENFSLKQCMYGLKTSCVPLLSNW-YSSCYMNNHAPETGE-KLINDYQKFS-E 99
           KFV LR++E+FSL QC +GL+TS    LS    S C+    A   G  K      K S +
Sbjct: 152 KFVGLRRYESFSLSQCTHGLETSRYSFLSKVRLSDCFCCKVANGVGNCKFAKKGIKISND 211

Query: 98  VMAILKNNLFSYWIYWLFSRLVVPIVQSSFYV 3
           V   L+N++F  WIYW FS +VVPI+ S FYV
Sbjct: 212 VKITLQNHIFQNWIYWFFSSIVVPIISSCFYV 243


>gb|AAX19886.1| telomerase reverse transcriptase catalytic subunit [Doryanthes
           excelsa] gi|60418920|gb|AAX19887.1| telomerase reverse
           transcriptase catalytic subunit [Doryanthes excelsa]
          Length = 1323

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -3

Query: 269 KFVHLRKFENFSLKQCMYGLKTSCVPLLSNW-YSSCYMNNHAPETGE-KLINDYQKFS-E 99
           KFV LR++E+FSL QC +GL+TS    LS    S C+    A   G  K      K S +
Sbjct: 573 KFVGLRRYESFSLSQCTHGLETSRYSFLSKVRLSDCFCCKVANGVGNCKFAKKGIKISND 632

Query: 98  VMAILKNNLFSYWIYWLFSRLVVPIVQSSFYV 3
           V   L+N++F  WIYW FS +VVPI+ S FYV
Sbjct: 633 VKITLQNHIFQNWIYWFFSSIVVPIISSCFYV 664


>gb|AAS91217.1| telomerase reverse transcriptase catalytic subunit [Doryanthes
           excelsa]
          Length = 291

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -3

Query: 269 KFVHLRKFENFSLKQCMYGLKTSCVPLLSNW-YSSCYMNNHAPETGE-KLINDYQKFS-E 99
           KFV LR++E+FSL QC +GL+TS    LS    S C+    A   G  K      K S +
Sbjct: 41  KFVGLRRYESFSLSQCTHGLETSRYSFLSKVRLSDCFCCKVANGVGNCKFAKKGIKISND 100

Query: 98  VMAILKNNLFSYWIYWLFSRLVVPIVQSSFYV 3
           V   L+N++F  WIYW FS +VVPI+ S FYV
Sbjct: 101 VKITLQNHIFQNWIYWFFSSIVVPIISSCFYV 132


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