BLASTX nr result

ID: Coptis24_contig00028816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028816
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260...   195   1e-47
emb|CBI19022.3| unnamed protein product [Vitis vinifera]              187   3e-45
ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
gb|ACD56615.1| predicted protein [Gossypioides kirkii]                161   2e-37
ref|XP_002306636.1| predicted protein [Populus trichocarpa] gi|2...   159   9e-37

>ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260772 [Vitis vinifera]
          Length = 200

 Score =  195 bits (495), Expect = 1e-47
 Identities = 111/199 (55%), Positives = 132/199 (66%), Gaps = 4/199 (2%)
 Frame = -1

Query: 769 MNQYGEEHPFC-YFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 593
           MN Y E++P C YFHPKE +VGVC  CL ERLLILA+KQGH  L K    T++++++K  
Sbjct: 1   MNLYREDNPCCCYFHPKEVIVGVCPLCLNERLLILAAKQGHHSLAKGHHRTHSLMHKKPP 60

Query: 592 LNIPKIFALGSFLHRPP--PTKSKDFDQDTSTSQEDSFISIKFEDNGIVSWDKGANTKVS 419
           +N+PKIFALGSFL R      KS   D D STSQEDSFISIKFEDNG+ SW+K   TKV 
Sbjct: 61  INLPKIFALGSFLTRLEFRHWKSDHSDHDASTSQEDSFISIKFEDNGVASWEKTTATKVP 120

Query: 418 IGPLNKSITHKSSIGTTKTVVEHVKAHSSPLWWRKRIGQLVQLVRWKKSSKANVCH-XXX 242
           +         K   G TK+VVEH K  ++ L WRKRIG L QL+RWK+SSKANVCH    
Sbjct: 121 LQHCTNMPLSKEVKG-TKSVVEHAKPRAT-LRWRKRIGHLFQLIRWKRSSKANVCHVGSK 178

Query: 241 XXXXXXXXXGWIRTLTKKK 185
                    GWIRTLTK+K
Sbjct: 179 VEGVKVMRKGWIRTLTKRK 197


>emb|CBI19022.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  187 bits (474), Expect = 3e-45
 Identities = 102/176 (57%), Positives = 122/176 (69%), Gaps = 3/176 (1%)
 Frame = -1

Query: 769 MNQYGEEHPFC-YFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 593
           MN Y E++P C YFHPKE +VGVC  CL ERLLILA+KQGH  L K    T++++++K  
Sbjct: 1   MNLYREDNPCCCYFHPKEVIVGVCPLCLNERLLILAAKQGHHSLAKGHHRTHSLMHKKPP 60

Query: 592 LNIPKIFALGSFLHRPP--PTKSKDFDQDTSTSQEDSFISIKFEDNGIVSWDKGANTKVS 419
           +N+PKIFALGSFL R      KS   D D STSQEDSFISIKFEDNG+ SW+K   TKV 
Sbjct: 61  INLPKIFALGSFLTRLEFRHWKSDHSDHDASTSQEDSFISIKFEDNGVASWEKTTATKVP 120

Query: 418 IGPLNKSITHKSSIGTTKTVVEHVKAHSSPLWWRKRIGQLVQLVRWKKSSKANVCH 251
           +         K   G TK+VVEH K  ++ L WRKRIG L QL+RWK+SSKANVCH
Sbjct: 121 LQHCTNMPLSKEVKG-TKSVVEHAKPRAT-LRWRKRIGHLFQLIRWKRSSKANVCH 174


>ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|222843961|gb|EEE81508.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  168 bits (425), Expect = 1e-39
 Identities = 97/202 (48%), Positives = 122/202 (60%), Gaps = 12/202 (5%)
 Frame = -1

Query: 754 EEHPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKSTLNIPKI 575
           E++ +CYFHPKE  VG+C  CL ERLLILA+KQG L   ++T       +RK  +N+ KI
Sbjct: 7   EDNSYCYFHPKEVFVGICPLCLNERLLILATKQGSLSAARETHRNEGTAHRKPPINLTKI 66

Query: 574 FALGSFLHRPP--PTKSKDFDQDTS-TSQEDSFISIKFEDNGIVSWDKGANTKVSIGP-- 410
           FA G  L+R      KS + DQD + TSQEDSFISIKFEDNG   W+KG  +KVSI P  
Sbjct: 67  FAFGYLLNRFEFRHGKSDNSDQDAAYTSQEDSFISIKFEDNGAAFWEKGTVSKVSIEPCS 126

Query: 409 ------LNKSITHKSSIGTTKTVVEHVKAHSSPLWWRKRIGQLVQLVRWKKSS-KANVCH 251
                 LNK            TV+EH K H+S L WR+RIG + QL+R K+SS K ++CH
Sbjct: 127 KSWNQNLNKEAKQGKDTKEAMTVIEHAKPHAS-LRWRRRIGHMFQLIRRKRSSNKGHMCH 185

Query: 250 XXXXXXXXXXXXGWIRTLTKKK 185
                       GWIRTLTK++
Sbjct: 186 VGTEVEGVKVRKGWIRTLTKRR 207


>gb|ACD56615.1| predicted protein [Gossypioides kirkii]
          Length = 196

 Score =  161 bits (407), Expect = 2e-37
 Identities = 96/200 (48%), Positives = 125/200 (62%), Gaps = 7/200 (3%)
 Frame = -1

Query: 769 MNQYGEEHPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLY----R 602
           M  Y E++  CYFHPKE ++GVC  CL ERLL LASKQ         +S++ +++    +
Sbjct: 2   MKGYREDNSCCYFHPKEVVIGVCPLCLNERLLFLASKQAQRSSSSTCKSSHRLIHGVAVK 61

Query: 601 KSTLNIPKIFALGSFLHRP--PPTKSKDFD-QDTSTSQEDSFISIKFEDNGIVSWDKGAN 431
           K  +N+PKIFALGS L+R      KS++ D  D STSQEDSFISIKFE+NG+ SWDKG  
Sbjct: 62  KPPINLPKIFALGSLLNRLEFKHCKSENSDAHDASTSQEDSFISIKFEENGVGSWDKGTV 121

Query: 430 TKVSIGPLNKSITHKSSIGTTKTVVEHVKAHSSPLWWRKRIGQLVQLVRWKKSSKANVCH 251
           +KVS+   + S++   S  T K+V+EH K  +S L WRKRIG L QL+RWK+SSK     
Sbjct: 122 SKVSLE--HCSMSWNPSKDTKKSVIEHAKPGAS-LRWRKRIGHLFQLIRWKRSSKVE--- 175

Query: 250 XXXXXXXXXXXXGWIRTLTK 191
                        WIR+LTK
Sbjct: 176 ---GVKVMRRKGWWIRSLTK 192


>ref|XP_002306636.1| predicted protein [Populus trichocarpa] gi|222856085|gb|EEE93632.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  159 bits (401), Expect = 9e-37
 Identities = 95/207 (45%), Positives = 120/207 (57%), Gaps = 12/207 (5%)
 Frame = -1

Query: 769 MNQY-GEEHPFCYFHPKENLVGVCAHCLKERLLILASKQGHLPLPKDTRSTYNVLYRKST 593
           MN Y  E++ +CYFHPKE +VGVC  CL ERLLILA+KQG+L   +         ++K  
Sbjct: 1   MNAYRSEDNSYCYFHPKEVVVGVCPLCLSERLLILAAKQGNLSSARAAHRNEGTTHKKPP 60

Query: 592 LNIPKIFALGSFLHRPP--PTKSKDFDQDTS-TSQEDSFISIKFEDNGIVSWDKGANTKV 422
           +N+PKIFALGSFL+R      KS + D D   TSQEDSFISIKFEDNG  SW+KG  +KV
Sbjct: 61  INLPKIFALGSFLNRLEFRNWKSNNSDHDAEPTSQEDSFISIKFEDNGAASWEKGTVSKV 120

Query: 421 SIGP--------LNKSITHKSSIGTTKTVVEHVKAHSSPLWWRKRIGQLVQLVRWKKSSK 266
            I P        LN        I  T +++E VK  SS L WR+ IG +  L+RWK+S+ 
Sbjct: 121 FIDPCSQPWNQNLNMEAKEGKDIKETVSMIEQVKPRSS-LRWRRGIGHMFHLIRWKRSTM 179

Query: 265 ANVCHXXXXXXXXXXXXGWIRTLTKKK 185
                             WIRTLTK++
Sbjct: 180 VE---------GVKVRKSWIRTLTKRR 197


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