BLASTX nr result

ID: Coptis24_contig00028783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028783
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arab...   126   2e-27
gb|ABK28469.1| unknown [Arabidopsis thaliana]                         125   4e-27
gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana]        125   4e-27
ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana] ...   125   4e-27

>ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|222842426|gb|EEE79973.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/87 (72%), Positives = 65/87 (74%)
 Frame = -1

Query: 312 QFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTY 133
           QFPGP                 LTEPFL TWNG+Q RRNSWQDGVQ TNCPILPGRNWTY
Sbjct: 48  QFPGPLLNATTNDVLNINIHNNLTEPFLMTWNGLQMRRNSWQDGVQETNCPILPGRNWTY 107

Query: 132 SFQMKDQIGSFFYFPSLLLQKAACGYG 52
           SFQ+KDQIGSFFYFPSLLL KAA GYG
Sbjct: 108 SFQVKDQIGSFFYFPSLLLHKAAGGYG 134


>ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arabidopsis lyrata subsp.
           lyrata] gi|297334886|gb|EFH65304.1| hypothetical protein
           ARALYDRAFT_476726 [Arabidopsis lyrata subsp. lyrata]
          Length = 545

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/87 (67%), Positives = 64/87 (73%)
 Frame = -1

Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130
           FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY 
Sbjct: 54  FPGPMLNATANDVIIVNIFNNLHEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113

Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49
           FQ+KDQIGS+FYFPSLLLQKAA GYGA
Sbjct: 114 FQVKDQIGSYFYFPSLLLQKAAGGYGA 140


>gb|ABK28469.1| unknown [Arabidopsis thaliana]
          Length = 545

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/87 (66%), Positives = 64/87 (73%)
 Frame = -1

Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130
           FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY 
Sbjct: 54  FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113

Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49
           FQ+KDQIGS+FYFP+LLLQKAA GYGA
Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140


>gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana]
          Length = 545

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/87 (66%), Positives = 64/87 (73%)
 Frame = -1

Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130
           FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY 
Sbjct: 54  FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113

Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49
           FQ+KDQIGS+FYFP+LLLQKAA GYGA
Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140


>ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana]
           gi|91806095|gb|ABE65776.1| multi-copper oxidase type I
           family protein [Arabidopsis thaliana]
           gi|332197638|gb|AEE35759.1| SKU5 similar 18 protein
           [Arabidopsis thaliana]
          Length = 545

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/87 (66%), Positives = 64/87 (73%)
 Frame = -1

Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130
           FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY 
Sbjct: 54  FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113

Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49
           FQ+KDQIGS+FYFP+LLLQKAA GYGA
Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140


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