BLASTX nr result
ID: Coptis24_contig00028783
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028783 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|2... 133 2e-29 ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arab... 126 2e-27 gb|ABK28469.1| unknown [Arabidopsis thaliana] 125 4e-27 gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana] 125 4e-27 ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana] ... 125 4e-27 >ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|222842426|gb|EEE79973.1| predicted protein [Populus trichocarpa] Length = 546 Score = 133 bits (334), Expect = 2e-29 Identities = 63/87 (72%), Positives = 65/87 (74%) Frame = -1 Query: 312 QFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTY 133 QFPGP LTEPFL TWNG+Q RRNSWQDGVQ TNCPILPGRNWTY Sbjct: 48 QFPGPLLNATTNDVLNINIHNNLTEPFLMTWNGLQMRRNSWQDGVQETNCPILPGRNWTY 107 Query: 132 SFQMKDQIGSFFYFPSLLLQKAACGYG 52 SFQ+KDQIGSFFYFPSLLL KAA GYG Sbjct: 108 SFQVKDQIGSFFYFPSLLLHKAAGGYG 134 >ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arabidopsis lyrata subsp. lyrata] gi|297334886|gb|EFH65304.1| hypothetical protein ARALYDRAFT_476726 [Arabidopsis lyrata subsp. lyrata] Length = 545 Score = 126 bits (316), Expect = 2e-27 Identities = 59/87 (67%), Positives = 64/87 (73%) Frame = -1 Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130 FPGP L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY Sbjct: 54 FPGPMLNATANDVIIVNIFNNLHEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113 Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49 FQ+KDQIGS+FYFPSLLLQKAA GYGA Sbjct: 114 FQVKDQIGSYFYFPSLLLQKAAGGYGA 140 >gb|ABK28469.1| unknown [Arabidopsis thaliana] Length = 545 Score = 125 bits (314), Expect = 4e-27 Identities = 58/87 (66%), Positives = 64/87 (73%) Frame = -1 Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130 FPGP L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY Sbjct: 54 FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113 Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49 FQ+KDQIGS+FYFP+LLLQKAA GYGA Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140 >gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana] Length = 545 Score = 125 bits (314), Expect = 4e-27 Identities = 58/87 (66%), Positives = 64/87 (73%) Frame = -1 Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130 FPGP L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY Sbjct: 54 FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113 Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49 FQ+KDQIGS+FYFP+LLLQKAA GYGA Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140 >ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana] gi|91806095|gb|ABE65776.1| multi-copper oxidase type I family protein [Arabidopsis thaliana] gi|332197638|gb|AEE35759.1| SKU5 similar 18 protein [Arabidopsis thaliana] Length = 545 Score = 125 bits (314), Expect = 4e-27 Identities = 58/87 (66%), Positives = 64/87 (73%) Frame = -1 Query: 309 FPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPILPGRNWTYS 130 FPGP L EPFL TWNG+Q R+NSWQDGV+GTNCPILPG NWTY Sbjct: 54 FPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYR 113 Query: 129 FQMKDQIGSFFYFPSLLLQKAACGYGA 49 FQ+KDQIGS+FYFP+LLLQKAA GYGA Sbjct: 114 FQVKDQIGSYFYFPTLLLQKAAGGYGA 140