BLASTX nr result

ID: Coptis24_contig00028763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028763
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 26/65 (40%), Positives = 43/65 (66%)
 Frame = +3

Query: 75   GEEDQIVWAQSQQGSYIMKDTYDSVRGMKVPVRWYSIVWFTNRIPRHSFITWMALKKGMK 254
            G++D+IVW  S    +++K  ++ +R  +  V W+ IVWF N +PRHSF+ WMA+++ + 
Sbjct: 1182 GQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 1241

Query: 255  TLQKL 269
            T  KL
Sbjct: 1242 TQDKL 1246


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 25/65 (38%), Positives = 42/65 (64%)
 Frame = +3

Query: 75  GEEDQIVWAQSQQGSYIMKDTYDSVRGMKVPVRWYSIVWFTNRIPRHSFITWMALKKGMK 254
           G++D++VW  S    + +K  ++ +R  +  V W+ IVWF N +PRHSF+ WMA+++ + 
Sbjct: 309 GQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 368

Query: 255 TLQKL 269
           T  KL
Sbjct: 369 TQDKL 373


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/65 (38%), Positives = 41/65 (63%)
 Frame = +3

Query: 75  GEEDQIVWAQSQQGSYIMKDTYDSVRGMKVPVRWYSIVWFTNRIPRHSFITWMALKKGMK 254
           G++D+IVW  S    + +K  ++ +R  +  V W+ IVWF N +PRHSF+ WM +++ + 
Sbjct: 127 GQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 186

Query: 255 TLQKL 269
           T  KL
Sbjct: 187 TQDKL 191


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 24/65 (36%), Positives = 41/65 (63%)
 Frame = +3

Query: 75   GEEDQIVWAQSQQGSYIMKDTYDSVRGMKVPVRWYSIVWFTNRIPRHSFITWMALKKGMK 254
            G++D+I+W  S    + +K  ++ +R  +  V W+ IVWF N +PRHSF+ WM +++ + 
Sbjct: 842  GQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 901

Query: 255  TLQKL 269
            T  KL
Sbjct: 902  TQDKL 906


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