BLASTX nr result

ID: Coptis24_contig00028744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028744
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553657.1| PREDICTED: probable pectinesterase/pectinest...   131   5e-29
ref|XP_002268492.2| PREDICTED: probable pectinesterase/pectinest...   129   2e-28
ref|XP_002330223.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_003520743.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   125   5e-27
ref|XP_002880312.1| pectinesterase family protein [Arabidopsis l...   125   5e-27

>ref|XP_003553657.1| PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like
           [Glycine max]
          Length = 610

 Score =  131 bits (330), Expect = 5e-29
 Identities = 70/140 (50%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
 Frame = +1

Query: 4   VSLGLFNRGW--GQKVNMGKWGRGRKLLFSDTESGRHGRLPLSLSSQHSEVFEKASG--R 171
           VSLGLF +GW   +K++      GR L F      R+GRLPL +S++   +++ A G  R
Sbjct: 228 VSLGLFTKGWVPEKKISTSWKTNGRHLGF------RNGRLPLKMSNRVRAIYDSARGHGR 281

Query: 172 KLLQSSSDTXXXXXXXXXNPNGSGNFTTISGAVAAAPNKTVITDGYFIIYVVSGVYEEYV 351
           KLLQ +S +         + +GSGNFTTI+ A+AAAPN TV +DGYF+I+V  GVY+EY+
Sbjct: 282 KLLQDNSQSVLVRDIVVVSQDGSGNFTTINDAIAAAPNNTVASDGYFLIFVTQGVYQEYI 341

Query: 352 NIDKNKQNIMMIGDGINQTI 411
           +I KNK+N+MM+GDGINQTI
Sbjct: 342 SIAKNKKNLMMVGDGINQTI 361


>ref|XP_002268492.2| PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like
           [Vitis vinifera]
          Length = 556

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/136 (50%), Positives = 90/136 (66%)
 Frame = +1

Query: 4   VSLGLFNRGWGQKVNMGKWGRGRKLLFSDTESGRHGRLPLSLSSQHSEVFEKASGRKLLQ 183
           VSL LF +GW  K   GK  + RK L        +GRLPL +SSQ+ +++E  S RKLL 
Sbjct: 177 VSLSLFTKGWVPKQKKGKVVKARKHL-----PFGNGRLPLKMSSQNRKLYESLSNRKLLD 231

Query: 184 SSSDTXXXXXXXXXNPNGSGNFTTISGAVAAAPNKTVITDGYFIIYVVSGVYEEYVNIDK 363
           + +D          N +GSGNF TI+ A+A APN T  ++GYF+IY+ +GVYEEYV+I K
Sbjct: 232 TGNDQVSISDIVTVNQDGSGNFATINDAIAVAPNNTDGSNGYFVIYIQAGVYEEYVSIAK 291

Query: 364 NKQNIMMIGDGINQTI 411
           NK+ +MMIGDGINQT+
Sbjct: 292 NKKYLMMIGDGINQTV 307


>ref|XP_002330223.1| predicted protein [Populus trichocarpa] gi|222871679|gb|EEF08810.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +1

Query: 4   VSLGLFNRGWGQKVNMGKWGRGRKLLFSDTESGRHGRLPLSLSSQHSEVFEKASGRKLLQ 183
           V+L LF RGW      G++   RK +FSD E G    LPL +SS+  +++E  SGR++L+
Sbjct: 182 VALALFTRGWAHSTMKGRYLTERKHVFSDLEDGASKGLPLMMSSKDKQIYESVSGRRVLK 241

Query: 184 SSSDTXXXXXXXXX-NPNGSGNFTTISGAVAAAPNKTVITDGYFIIYVVSGVYEEYVNID 360
           +S+ T          +P GSG F TI+ AVAAAPN T  ++GY++IYVV+GV  EYV+I 
Sbjct: 242 TSNLTGVLVSKVVVVDPYGSGKFRTITEAVAAAPNNTFASNGYYVIYVVAGVSNEYVSIP 301

Query: 361 KNKQNIMMIGDGINQTI 411
           K+K+ +MMIG GINQT+
Sbjct: 302 KSKKYLMMIGAGINQTV 318


>ref|XP_003520743.1| PREDICTED: LOW QUALITY PROTEIN: probable
           pectinesterase/pectinesterase inhibitor 7-like [Glycine
           max]
          Length = 615

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
 Frame = +1

Query: 4   VSLGLFNRGW--GQKVNMGKWGRGRKLLFSDTESGRHGRLPLSLSSQHSEVFEKASG--R 171
           VSL LF +GW   +K++      GR L F       +GRLPL +S++   +++ A G  R
Sbjct: 233 VSLDLFTKGWVAEKKISTSWQVNGRHLDF------HNGRLPLKMSNRVRAIYDSARGHGR 286

Query: 172 KLLQSSSDTXXXXXXXXXNPNGSGNFTTISGAVAAAPNKTVITDGYFIIYVVSGVYEEYV 351
           KLLQ +S +         + +GSGNFTTI+ A+A APN TV  DGYF+I++  GVY+EY+
Sbjct: 287 KLLQDNSQSVLVSDIVVVSQDGSGNFTTINDAIAVAPNNTVANDGYFLIFITQGVYQEYI 346

Query: 352 NIDKNKQNIMMIGDGINQTI 411
           +I KNK+N+MMIGDGINQTI
Sbjct: 347 SIAKNKKNLMMIGDGINQTI 366


>ref|XP_002880312.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326151|gb|EFH56571.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/137 (46%), Positives = 89/137 (64%)
 Frame = +1

Query: 1   GVSLGLFNRGWGQKVNMGKWGRGRKLLFSDTESGRHGRLPLSLSSQHSEVFEKASGRKLL 180
           GVSL LF++GW  +    +     +  F      R+GRLPL ++ +   ++   + RKLL
Sbjct: 174 GVSLALFSKGWVPRRQRSRPIWQPQASFKKFFGFRNGRLPLKMTEKTRAIYNTVTRRKLL 233

Query: 181 QSSSDTXXXXXXXXXNPNGSGNFTTISGAVAAAPNKTVITDGYFIIYVVSGVYEEYVNID 360
           QS  D          N NG+GNFTTI+ A+AAAPNKT  ++GYF+IYV +G+YEEYV+I 
Sbjct: 234 QSDVDAVQVSDIVTVNQNGTGNFTTINDAIAAAPNKTDGSNGYFLIYVTAGLYEEYVDIP 293

Query: 361 KNKQNIMMIGDGINQTI 411
           K+K+ +MMIGDGINQT+
Sbjct: 294 KSKRYVMMIGDGINQTV 310


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