BLASTX nr result
ID: Coptis24_contig00028719
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00028719
(1503 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278470.1| PREDICTED: granule-bound starch synthase 2, ... 816 0.0
ref|XP_002324061.1| predicted protein [Populus trichocarpa] gi|2... 807 0.0
sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch syntha... 796 0.0
ref|XP_002531856.1| starch synthase, putative [Ricinus communis]... 795 0.0
ref|XP_004169062.1| PREDICTED: starch synthase 2, chloroplastic/... 793 0.0
>ref|XP_002278470.1| PREDICTED: granule-bound starch synthase 2,
chloroplastic/amyloplastic-like [Vitis vinifera]
Length = 772
Score = 816 bits (2107), Expect = 0.0
Identities = 376/454 (82%), Positives = 414/454 (91%)
Frame = -2
Query: 1502 VVVPRYSNYAELSDTGVRRRYNITGQDVEVTYHRTYIDGVDFVFIDNHMFHHIEHNIYGG 1323
VV PRY NYAE +TGVR++Y + GQD+EVTY + YIDGVDFVFID+HMF HIE NIYGG
Sbjct: 319 VVAPRYGNYAEAQETGVRKKYKVDGQDMEVTYFQAYIDGVDFVFIDSHMFRHIEKNIYGG 378
Query: 1322 ERVEILRRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 1143
R++IL+RM+LFCKAA+EVPW+VPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL
Sbjct: 379 NRMDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 438
Query: 1142 MSYTRSVLVIHNIAHQGRGPVTDFSSMDLPGHYIDLFKLYDPIGGEHCNIFAAGLKAADR 963
M YTRS LVIHNIAHQGRGPV DFS LP HY+DLFKLYDP+GGEH NIFAAGLK ADR
Sbjct: 439 MQYTRSALVIHNIAHQGRGPVEDFSYTGLPEHYLDLFKLYDPVGGEHFNIFAAGLKTADR 498
Query: 962 IVTVSHGYAWELKTLDGGWGLHGIINENHWKLSGIVNGIDVKEWNPQVDSHLQSDGYSNY 783
+VTVSHGYAWELKT +GGWGLH IINEN WKL GIVNGIDVK+WNP++D +L+SDGY NY
Sbjct: 499 VVTVSHGYAWELKTSEGGWGLHQIINENDWKLRGIVNGIDVKDWNPELDIYLESDGYVNY 558
Query: 782 SLENLQTGKPKCKKALQKELGLPIRHNVPLIGFIGRLDDQKGVDLIAEAIPWMVGQDVQL 603
SLE L TGKP+CK ALQKELGLPIR +VPLIGFIGRLD QKGVDLIAEA+PWMVGQDVQL
Sbjct: 559 SLETLHTGKPQCKAALQKELGLPIREDVPLIGFIGRLDHQKGVDLIAEAVPWMVGQDVQL 618
Query: 602 VMLGTGRPDLENMLRNFENQYHDRIRGWVGFSVEMAHRITAGADILLMPSRFEPCGLNQL 423
VMLGTGR DLE MLR FE+Q+HD+IRGWVGFSV+MAHRITAGADILLMPSRFEPCGLNQL
Sbjct: 619 VMLGTGRNDLEQMLRQFESQHHDKIRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQL 678
Query: 422 YAMGYGTIPVVHAVGGLRDTVQPFDPFNESGVGWTFDSAETNKLIHALGNCLYTYREYKT 243
YAM YGTIPVVHAVGGLRDTVQPFDP+NESG+GWTFD AE N+LIHALGNCL TYR+YK
Sbjct: 679 YAMNYGTIPVVHAVGGLRDTVQPFDPYNESGLGWTFDRAEANRLIHALGNCLLTYRQYKQ 738
Query: 242 SWEGIQKRGMMQDLSWDNAAQNYEDVLVAAKFHW 141
SWEG+Q+RGMMQDLSWD+AAQNYE+VLVAAK+ W
Sbjct: 739 SWEGLQRRGMMQDLSWDHAAQNYEEVLVAAKYQW 772
>ref|XP_002324061.1| predicted protein [Populus trichocarpa] gi|222867063|gb|EEF04194.1|
predicted protein [Populus trichocarpa]
Length = 742
Score = 807 bits (2084), Expect = 0.0
Identities = 371/454 (81%), Positives = 411/454 (90%)
Frame = -2
Query: 1502 VVVPRYSNYAELSDTGVRRRYNITGQDVEVTYHRTYIDGVDFVFIDNHMFHHIEHNIYGG 1323
VV PRY NYAE D GVR+RY + GQD+EVT+ +TYIDGVDFVFID+H+F HIE NIYGG
Sbjct: 289 VVAPRYGNYAEPHDIGVRKRYKVDGQDIEVTFFQTYIDGVDFVFIDSHVFCHIEGNIYGG 348
Query: 1322 ERVEILRRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 1143
R++IL+RM LFCKAAVEVPW+VPCGG+CYGDGNLVFIANDWHTALLPVYLKAYYRDNGL
Sbjct: 349 SRLDILKRMALFCKAAVEVPWHVPCGGICYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 408
Query: 1142 MSYTRSVLVIHNIAHQGRGPVTDFSSMDLPGHYIDLFKLYDPIGGEHCNIFAAGLKAADR 963
M +TRS+LVIHNIAHQGRGPV DF +DLP HYIDLFKL+DP+GGEH NIFAAGLKAADR
Sbjct: 409 MKFTRSILVIHNIAHQGRGPVDDFFHVDLPEHYIDLFKLHDPVGGEHFNIFAAGLKAADR 468
Query: 962 IVTVSHGYAWELKTLDGGWGLHGIINENHWKLSGIVNGIDVKEWNPQVDSHLQSDGYSNY 783
+VTVSHGY+WELKT +GGWGLH II EN WK SGIVNGID KEWNP D HL SDGY+NY
Sbjct: 469 VVTVSHGYSWELKTSEGGWGLHNIIKENDWKFSGIVNGIDTKEWNPLFDVHLTSDGYTNY 528
Query: 782 SLENLQTGKPKCKKALQKELGLPIRHNVPLIGFIGRLDDQKGVDLIAEAIPWMVGQDVQL 603
SLE L TGKP+CK ALQKELGLP+R +VP+IGFIGRLD QKGVDLIAEA+PWM+GQDVQL
Sbjct: 529 SLETLHTGKPQCKAALQKELGLPVRPDVPMIGFIGRLDQQKGVDLIAEAVPWMLGQDVQL 588
Query: 602 VMLGTGRPDLENMLRNFENQYHDRIRGWVGFSVEMAHRITAGADILLMPSRFEPCGLNQL 423
VMLGTGR DLE MLR FENQ+HD+IRGWVGFSV+MAHRITAG+D+LLMPSRFEPCGLNQL
Sbjct: 589 VMLGTGRQDLEQMLRQFENQHHDKIRGWVGFSVKMAHRITAGSDVLLMPSRFEPCGLNQL 648
Query: 422 YAMGYGTIPVVHAVGGLRDTVQPFDPFNESGVGWTFDSAETNKLIHALGNCLYTYREYKT 243
YAM YGTIPVVHAVGGLRDTVQPFDPFNESG+GWTFD AE NKLIHALGNCL+TYREYK
Sbjct: 649 YAMMYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFDGAEANKLIHALGNCLFTYREYKK 708
Query: 242 SWEGIQKRGMMQDLSWDNAAQNYEDVLVAAKFHW 141
SWEG+Q+RGM QDLSWD+AA+ YE+VLVAAK+ W
Sbjct: 709 SWEGLQRRGMTQDLSWDHAAEKYEEVLVAAKYQW 742
>sp|Q43847.3|SSY2_SOLTU RecName: Full=Granule-bound starch synthase 2,
chloroplastic/amyloplastic; AltName: Full=Granule-bound
starch synthase II; Short=GBSS-II; Short=SS II; Flags:
Precursor gi|48927500|emb|CAA61241.2| soluble starch
synthase II precursor [Solanum tuberosum]
Length = 767
Score = 796 bits (2055), Expect = 0.0
Identities = 369/454 (81%), Positives = 408/454 (89%)
Frame = -2
Query: 1502 VVVPRYSNYAELSDTGVRRRYNITGQDVEVTYHRTYIDGVDFVFIDNHMFHHIEHNIYGG 1323
VV PRY NY E D+GVR+ Y + GQDVEVTY + +IDGVDFVFID+HMF HI +NIYGG
Sbjct: 314 VVAPRYDNYPEPQDSGVRKIYKVDGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGG 373
Query: 1322 ERVEILRRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 1143
RV+IL+RM+LFCKAA+EVPW+VPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNG+
Sbjct: 374 NRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGI 433
Query: 1142 MSYTRSVLVIHNIAHQGRGPVTDFSSMDLPGHYIDLFKLYDPIGGEHCNIFAAGLKAADR 963
M+YTRSVLVIHNIAHQGRGP+ DFS +DLP HY+D FKLYDP+GGEH NIFAAGLK ADR
Sbjct: 434 MNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADR 493
Query: 962 IVTVSHGYAWELKTLDGGWGLHGIINENHWKLSGIVNGIDVKEWNPQVDSHLQSDGYSNY 783
+VTVSHGY+WELKT GGWGLH IINEN WKL GIVNGID KEWNP++D HLQSDGY NY
Sbjct: 494 VVTVSHGYSWELKTSQGGWGLHQIINENDWKLQGIVNGIDTKEWNPELDVHLQSDGYMNY 553
Query: 782 SLENLQTGKPKCKKALQKELGLPIRHNVPLIGFIGRLDDQKGVDLIAEAIPWMVGQDVQL 603
SL+ LQTGKP+CK ALQKELGLP+R +VPLIGFIGRLD QKGVDLIAEA+PWM+GQDVQL
Sbjct: 554 SLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQL 613
Query: 602 VMLGTGRPDLENMLRNFENQYHDRIRGWVGFSVEMAHRITAGADILLMPSRFEPCGLNQL 423
VMLGTGR DLE MLR FE Q++D+IRGWVGFSV+ +HRITAGADILLMPSRFEPCGLNQL
Sbjct: 614 VMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQL 673
Query: 422 YAMGYGTIPVVHAVGGLRDTVQPFDPFNESGVGWTFDSAETNKLIHALGNCLYTYREYKT 243
YAM YGTIPVVHAVGGLRDTVQPFDPFNESG+GWTF AE ++LIHALGNCL TYREYK
Sbjct: 674 YAMKYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKK 733
Query: 242 SWEGIQKRGMMQDLSWDNAAQNYEDVLVAAKFHW 141
SWEGIQ R M QDLSWDNAAQNYE+VL+AAK+ W
Sbjct: 734 SWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW 767
>ref|XP_002531856.1| starch synthase, putative [Ricinus communis]
gi|223528506|gb|EEF30534.1| starch synthase, putative
[Ricinus communis]
Length = 754
Score = 795 bits (2053), Expect = 0.0
Identities = 368/454 (81%), Positives = 406/454 (89%)
Frame = -2
Query: 1502 VVVPRYSNYAELSDTGVRRRYNITGQDVEVTYHRTYIDGVDFVFIDNHMFHHIEHNIYGG 1323
VV PRY NYAE D GVR+RY + GQD EVTY + +IDGVDFVFI+ MF HIE NIYGG
Sbjct: 301 VVAPRYGNYAETQDIGVRKRYKVDGQDFEVTYFQAFIDGVDFVFIECPMFRHIESNIYGG 360
Query: 1322 ERVEILRRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 1143
RV+IL+RM+LFCKAA+EVPW+VPCGG+CYGDGNLVFIANDWHTALLPVYL+AYYRDNGL
Sbjct: 361 NRVDILKRMVLFCKAAIEVPWHVPCGGICYGDGNLVFIANDWHTALLPVYLRAYYRDNGL 420
Query: 1142 MSYTRSVLVIHNIAHQGRGPVTDFSSMDLPGHYIDLFKLYDPIGGEHCNIFAAGLKAADR 963
M +TRSVLVIHNIAHQGRGP+ DF DLP HYIDLFKLYDP+GG+H NIFAAGLK ADR
Sbjct: 421 MQFTRSVLVIHNIAHQGRGPMDDFVYTDLPEHYIDLFKLYDPVGGDHFNIFAAGLKTADR 480
Query: 962 IVTVSHGYAWELKTLDGGWGLHGIINENHWKLSGIVNGIDVKEWNPQVDSHLQSDGYSNY 783
+VTVSHGYAWELKT +GGWGLH IINEN WK SGIVNGID KEWNP D HL SDGY++Y
Sbjct: 481 VVTVSHGYAWELKTSEGGWGLHNIINENDWKFSGIVNGIDTKEWNPLCDVHLTSDGYTHY 540
Query: 782 SLENLQTGKPKCKKALQKELGLPIRHNVPLIGFIGRLDDQKGVDLIAEAIPWMVGQDVQL 603
SLE L TGK +CK ALQKELGLP+R +VPLIGFIGRLD QKGVDLIAEAIPWM+GQDVQL
Sbjct: 541 SLETLDTGKSQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAIPWMMGQDVQL 600
Query: 602 VMLGTGRPDLENMLRNFENQYHDRIRGWVGFSVEMAHRITAGADILLMPSRFEPCGLNQL 423
VMLGTGRPDLE +LR FE+Q+ D++RGWVGFSV+ AHRITAGADILLMPSRFEPCGLNQL
Sbjct: 601 VMLGTGRPDLEQLLRQFESQHSDKVRGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQL 660
Query: 422 YAMGYGTIPVVHAVGGLRDTVQPFDPFNESGVGWTFDSAETNKLIHALGNCLYTYREYKT 243
YAM YGTIPVVHAVGGLRDTVQPFDPFNESG+GWTFDSAE NKLIHALGNCL +YREYK
Sbjct: 661 YAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFDSAEANKLIHALGNCLLSYREYKK 720
Query: 242 SWEGIQKRGMMQDLSWDNAAQNYEDVLVAAKFHW 141
SWEG+Q+RGMMQDLSWD+AA+ YE+VLVAAK+ W
Sbjct: 721 SWEGLQRRGMMQDLSWDHAAEKYEEVLVAAKYQW 754
>ref|XP_004169062.1| PREDICTED: starch synthase 2, chloroplastic/amyloplastic-like
[Cucumis sativus]
Length = 816
Score = 793 bits (2047), Expect = 0.0
Identities = 363/454 (79%), Positives = 409/454 (90%)
Frame = -2
Query: 1502 VVVPRYSNYAELSDTGVRRRYNITGQDVEVTYHRTYIDGVDFVFIDNHMFHHIEHNIYGG 1323
V+VPRY+NYA L DTGVR+RY + GQD EV+Y +TY+DGVDFVFIDN FH+ E NIYGG
Sbjct: 363 VIVPRYANYAGLQDTGVRKRYKVHGQDYEVSYFQTYVDGVDFVFIDNSTFHNREQNIYGG 422
Query: 1322 ERVEILRRMILFCKAAVEVPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGL 1143
+R++IL+RM+LFCKAA+EVPWYVPCGGVCYGDGNLVF+ANDWHTALLPVYLKAYYRD+G+
Sbjct: 423 DRLDILKRMVLFCKAAIEVPWYVPCGGVCYGDGNLVFVANDWHTALLPVYLKAYYRDSGI 482
Query: 1142 MSYTRSVLVIHNIAHQGRGPVTDFSSMDLPGHYIDLFKLYDPIGGEHCNIFAAGLKAADR 963
M +TRS+LVIHNIAHQGRGPV DF +DLP HYID FKLYDP+GGEH NIFAAGLK ADR
Sbjct: 483 MKFTRSILVIHNIAHQGRGPVDDFYHVDLPEHYIDHFKLYDPVGGEHFNIFAAGLKTADR 542
Query: 962 IVTVSHGYAWELKTLDGGWGLHGIINENHWKLSGIVNGIDVKEWNPQVDSHLQSDGYSNY 783
+VTVSHGYAWELKT +GGWGLHGIINE WK+ GIVNGID KEW+P+ D HL SDGY+NY
Sbjct: 543 VVTVSHGYAWELKTTEGGWGLHGIINEIDWKMMGIVNGIDSKEWSPEYDVHLTSDGYTNY 602
Query: 782 SLENLQTGKPKCKKALQKELGLPIRHNVPLIGFIGRLDDQKGVDLIAEAIPWMVGQDVQL 603
SLE LQTGK +CK ALQKELGLPIR ++PLIGFIGRLD QKGVD+IAEAIPWMVGQ+VQL
Sbjct: 603 SLETLQTGKAQCKAALQKELGLPIREDIPLIGFIGRLDQQKGVDIIAEAIPWMVGQNVQL 662
Query: 602 VMLGTGRPDLENMLRNFENQYHDRIRGWVGFSVEMAHRITAGADILLMPSRFEPCGLNQL 423
VMLGTGR DLE MLR+FEN++ D+IRGWVGFS++MAHRITAG DILLMPSRFEPCGLNQL
Sbjct: 663 VMLGTGRQDLEQMLRDFENKHRDKIRGWVGFSIKMAHRITAGIDILLMPSRFEPCGLNQL 722
Query: 422 YAMGYGTIPVVHAVGGLRDTVQPFDPFNESGVGWTFDSAETNKLIHALGNCLYTYREYKT 243
YAM YGTIPVVH VGGLRDTV PFDPFNESG GWTFDSAE NKLIHALGNCL TY++YK
Sbjct: 723 YAMNYGTIPVVHRVGGLRDTVIPFDPFNESGYGWTFDSAEANKLIHALGNCLLTYKQYKK 782
Query: 242 SWEGIQKRGMMQDLSWDNAAQNYEDVLVAAKFHW 141
SWEG+Q+RGM QDLSWD+AA+ YE+VLVAAK+ W
Sbjct: 783 SWEGLQRRGMTQDLSWDHAAEKYEEVLVAAKYQW 816