BLASTX nr result

ID: Coptis24_contig00028717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028717
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]    61   1e-17
emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]    60   1e-17
emb|CAN82064.1| hypothetical protein VITISV_022772 [Vitis vinifera]    61   1e-17
emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera]    61   1e-17
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                62   1e-17

>emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]
          Length = 1403

 Score = 61.2 bits (147), Expect(2) = 1e-17
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -2

Query: 202  CCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYV 35
            C L +S+YGLKQSPRAWF RFS+V+   G +R  +DH+ F H +       ++VYV
Sbjct: 1093 CRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYV 1148



 Score = 53.1 bits (126), Expect(2) = 1e-17
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -1

Query: 299  DVKNVFLHGDLTEDIYMSQPPGFALQGE 216
            D+KNVFLHGDL E++YM QPPGF  QGE
Sbjct: 1061 DIKNVFLHGDLAEEVYMEQPPGFVAQGE 1088


>emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]
          Length = 1258

 Score = 60.5 bits (145), Expect(2) = 1e-17
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -2

Query: 202  CCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYV 35
            C L +S+YGLKQSPRAWF RFS+V+   G  R  +DH+ F H + +     ++VYV
Sbjct: 949  CRLRRSLYGLKQSPRAWFSRFSSVVQEFGMFRNTADHSVFYHHNSSGQCIYLVVYV 1004



 Score = 53.9 bits (128), Expect(2) = 1e-17
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -1

Query: 299  DVKNVFLHGDLTEDIYMSQPPGFALQGEYS 210
            D+KNVFLHGDL E++YM QPPGF  QGE S
Sbjct: 917  DIKNVFLHGDLVEEVYMEQPPGFVAQGESS 946


>emb|CAN82064.1| hypothetical protein VITISV_022772 [Vitis vinifera]
          Length = 1224

 Score = 61.2 bits (147), Expect(2) = 1e-17
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -2

Query: 202  CCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYV 35
            C L +S+YGLKQSPRAWF RFS+V+   G +R  +DH+ F H +       ++VYV
Sbjct: 895  CRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYV 950



 Score = 53.1 bits (126), Expect(2) = 1e-17
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -1

Query: 299 DVKNVFLHGDLTEDIYMSQPPGFALQGE 216
           D+KNVFLHGDL E++YM QPPGF  QGE
Sbjct: 863 DIKNVFLHGDLAEEVYMEQPPGFVAQGE 890


>emb|CAN70756.1| hypothetical protein VITISV_014702 [Vitis vinifera]
          Length = 1212

 Score = 61.2 bits (147), Expect(2) = 1e-17
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = -2

Query: 202  CCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYV 35
            C L +S+YGLKQSPRAWF RFS+V+   G +R  +DH+ F H +       ++VYV
Sbjct: 874  CRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYV 929



 Score = 53.1 bits (126), Expect(2) = 1e-17
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -1

Query: 299 DVKNVFLHGDLTEDIYMSQPPGFALQGE 216
           D+KNVFLHGDL E++YM QPPGF  QGE
Sbjct: 842 DIKNVFLHGDLAEEVYMEQPPGFVAQGE 869


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 61.6 bits (148), Expect(2) = 1e-17
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = -2

Query: 202 CCLLKSIYGLKQSPRAWFHRFSTVILSMGFIRCESDHTCFIHRSVANLRTIVLVYV 35
           C L +S+YGLKQSPRAWF +FSTVI   G  R  +DH+ F   S  +L   ++VYV
Sbjct: 776 CRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSLCIYLVVYV 831



 Score = 52.8 bits (125), Expect(2) = 1e-17
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = -1

Query: 299 DVKNVFLHGDLTEDIYMSQPPGFALQGEYSGKV 201
           D+KN FLHGDL E++YM QPPGF  QGE S  V
Sbjct: 743 DIKNAFLHGDLEEEVYMEQPPGFVAQGESSSLV 775


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