BLASTX nr result

ID: Coptis24_contig00028714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028714
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524598.1| transcription factor, putative [Ricinus comm...   343   5e-92
ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   319   6e-85
ref|XP_003542186.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   309   6e-82
ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE...   308   1e-81
ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   306   4e-81

>ref|XP_002524598.1| transcription factor, putative [Ricinus communis]
            gi|223536151|gb|EEF37806.1| transcription factor,
            putative [Ricinus communis]
          Length = 414

 Score =  343 bits (879), Expect = 5e-92
 Identities = 168/303 (55%), Positives = 207/303 (68%), Gaps = 7/303 (2%)
 Frame = +3

Query: 147  MGQLCDFCGGQRSMVYCRSDSACLCLSCDRNVHSANALSRRHSRTLLCEKCCSQPATIRC 326
            MG +CDFCG QRSMVYCRSD+ACLCLSCDRNVHSANALSRRHSRTLLCE+C SQPA IRC
Sbjct: 1    MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALIRC 60

Query: 327  LEEKTSLCQNCDWNAHGASTSSSPHKRQTIHCYSGCPSAAELSRIWSFVLNFPSMDDQSC 506
             +E+ SLCQ CDW  HG S SSS HKRQTI+CY+GCPSA+ELS +WSFVL+FPS+D +S 
Sbjct: 61   ADERLSLCQKCDWMVHGNSNSSSTHKRQTINCYTGCPSASELSSLWSFVLDFPSVDGEST 120

Query: 507  CEQRTGLMSIDENVSSNCWDPPGNTNMLDDDASGEXXXXXXXXXXXXMGS-SSMRVPSPI 683
            CEQ  GLMSI E+ S+N W PP  T  +  + SG              G   +   P  +
Sbjct: 121  CEQELGLMSIAEDSSTNTWGPPDKT--ISQNVSGAAAVNNACEIPKSSGCVGNSSAPQLM 178

Query: 684  PSRVNQTAGFMESTKPKKDSSETKRVGICEADYFEDFNASDMELNCENYDELFGVSQSNS 863
            P+ ++  AG   +  PK     TK   +CE D +EDFN  +++LN ENY+ELFG++ ++S
Sbjct: 179  PNNLDHPAGSANAPLPKLCCPGTKGPALCEDDLYEDFNMDEVDLNLENYEELFGIALNDS 238

Query: 864  EQLFENGGIDSLFGVKDLSVAASNCQGSLAGKG------KVVQPICXXXXXXXXXXXXKT 1025
            E+LFENGGIDSLFG+KD+S A SNCQG++A +G        VQP C            KT
Sbjct: 239  EELFENGGIDSLFGMKDMSAADSNCQGAVAAEGSSAGLVNAVQPACSNAASADSMMSAKT 298

Query: 1026 EPV 1034
            EP+
Sbjct: 299  EPI 301


>ref|XP_002265377.2| PREDICTED: zinc finger protein CONSTANS-LIKE 10 [Vitis vinifera]
          Length = 414

 Score =  319 bits (818), Expect = 6e-85
 Identities = 169/304 (55%), Positives = 206/304 (67%), Gaps = 9/304 (2%)
 Frame = +3

Query: 147  MGQLCDFCGGQRSMVYCRSDSACLCLSCDRNVHSANALSRRHSRTLLCEKCCSQPATIRC 326
            MGQLCDFCG QRSMVYCRSD+ACLCLSCDRNVHSANALSRRHSRTLLCE+C SQPAT+RC
Sbjct: 1    MGQLCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPATVRC 60

Query: 327  LEEKTSLCQNCDWNAHGASTSSSPHKRQTIHCYSGCPSAAELSRIWSFVLNFPSMDDQSC 506
            +EEK SLCQNC+W  HG++TS+S HKRQTI+CYSGCPSAAELSRIWSFVL F S+DD S 
Sbjct: 61   VEEKISLCQNCNWIGHGSTTSASDHKRQTINCYSGCPSAAELSRIWSFVLEFLSVDD-SN 119

Query: 507  CEQRTGLMSIDENVSSNCWDPPGNTNMLDDDASGE-XXXXXXXXXXXXMGSSSMRVPSPI 683
            CEQ   LMS+ EN   +C  PP N N+ D   +G              M SS +   +PI
Sbjct: 120  CEQGMVLMSLTENSVGSCSLPPVNNNINDSTVAGRTNAQENVDKSDLWMASSPVPALNPI 179

Query: 684  PSRVNQTAGFMESTKPKKDSSETKRVGICEAD--YFEDFNASDMELNCENYDELFGVSQS 857
             S V+Q    + S   K   S     GIC+ D   +EDF+ +D++L+ ENY+ELFGVSQ+
Sbjct: 180  SSSVDQPTDLVNSPTTKLCCS-----GICDDDDLLYEDFSMADVDLSIENYEELFGVSQN 234

Query: 858  NSEQLFENGGIDSLFGVKDLSVAASNCQGSLAGKG------KVVQPICXXXXXXXXXXXX 1019
            +SEQL ENGGIDSLFG+ +L    ++ +G+   +G      K +QP C            
Sbjct: 235  HSEQLLENGGIDSLFGIGNLPGTDASARGAYVAEGSSVVHIKAMQPACSNPISADSIISS 294

Query: 1020 KTEP 1031
            KT+P
Sbjct: 295  KTDP 298


>ref|XP_003542186.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max]
          Length = 409

 Score =  309 bits (792), Expect = 6e-82
 Identities = 163/303 (53%), Positives = 200/303 (66%), Gaps = 7/303 (2%)
 Frame = +3

Query: 147  MGQLCDFCGGQRSMVYCRSDSACLCLSCDRNVHSANALSRRHSRTLLCEKCCSQPATIRC 326
            MG +CDFCG QRSMVYCRSD+ACLCLSCDRNVHSANALS+RHSRTLLCE+C SQPA +RC
Sbjct: 1    MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCERCNSQPAFVRC 60

Query: 327  LEEKTSLCQNCDWNAHGASTSSSPHKRQTIHCYSGCPSAAELSRIWSFVLNFPSMDDQSC 506
            +EEK SLCQNCDW  HG STSSS HKRQ I+CYSGCPSAAELS IWSFVL+  ++  +S 
Sbjct: 61   VEEKISLCQNCDWLGHGTSTSSSTHKRQAINCYSGCPSAAELSSIWSFVLDIAAI-SEST 119

Query: 507  CEQRTGLMSIDENVSSNCWDPPGNTNMLDDDASGEXXXXXXXXXXXXMGSSSMRVPSPIP 686
            CEQ  GLMSI+EN S     PP   N+   D   +            +G+SSM   S  P
Sbjct: 120  CEQELGLMSINENKSVGV--PPEGQNVSGSDEVTD----QPALDKSLVGTSSMPESSSKP 173

Query: 687  SRVNQTAGFMESTKPKKDSSETKRVGICEAD-YFEDFNASDMELNCENYDELFGVSQSNS 863
              ++Q A        K     TK   +CE D  ++DFN  +++LN ENY+ELFG++ S+S
Sbjct: 174  RILDQPARPANECLSKLYCPATKFPALCENDNLYDDFNMDEVDLNLENYEELFGMALSHS 233

Query: 864  EQLFENGGIDSLFGVKDLSVAASNCQGSLAGKG------KVVQPICXXXXXXXXXXXXKT 1025
            E+LFENGGIDSLFG KD+S    +C+ ++A +G       V+QP C            KT
Sbjct: 234  EELFENGGIDSLFGTKDMSAGDFSCEDAIAAEGSSVGQVNVMQPACSNAASADSILSTKT 293

Query: 1026 EPV 1034
            EP+
Sbjct: 294  EPI 296


>ref|XP_002264506.2| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Vitis vinifera]
            gi|296085061|emb|CBI28476.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  308 bits (789), Expect = 1e-81
 Identities = 159/303 (52%), Positives = 201/303 (66%), Gaps = 7/303 (2%)
 Frame = +3

Query: 147  MGQLCDFCGGQRSMVYCRSDSACLCLSCDRNVHSANALSRRHSRTLLCEKCCSQPATIRC 326
            MG +CDFCG QRS+VYCRSD+A LCLSCDR+VHSANALSRRHSRTLLCE+C SQPA +RC
Sbjct: 1    MGYICDFCGEQRSIVYCRSDAASLCLSCDRHVHSANALSRRHSRTLLCERCNSQPAFVRC 60

Query: 327  LEEKTSLCQNCDWNAHGASTSSSPHKRQTIHCYSGCPSAAELSRIWSFVLNFPSMDDQSC 506
            +EEK SLCQNCDW  HG ST++S HK++TI+CYSGCPS+  LS +W FVL+ PS  + S 
Sbjct: 61   IEEKISLCQNCDWTGHGGSTTTSSHKKETINCYSGCPSSEGLSTMWPFVLDLPSTGN-ST 119

Query: 507  CEQRTGLMSIDENVSSNCWDPPGNTNMLDDDASGEXXXXXXXXXXXXM-GSSSMRVPSPI 683
            CEQ   LM ++E    N W PPGN++  D   + E            + GSSS+   +  
Sbjct: 120  CEQGLSLMCLNETSEMNSWGPPGNSSRQDASLTVEVNDANNVDKSSILIGSSSVPELNSP 179

Query: 684  PSRVNQTAGFMESTKPKKDSSETKRVGICEAD-YFEDFNASDMELNCENYDELFGVSQSN 860
              +++Q +G  + T PK     T  +G CE D  +EDFN  +++LN ENY+ELFGV+ S+
Sbjct: 180  SQKLDQPSGSADLTLPKLLCPGTDDLGFCEDDSLYEDFNMDEVDLNLENYEELFGVALSH 239

Query: 861  SEQLFENGGIDSLFGVKDLSVAASNCQGSLAGKGKV-----VQPICXXXXXXXXXXXXKT 1025
            SEQLFENGGIDSLFG  D S A S+CQG++  +G V     VQP              KT
Sbjct: 240  SEQLFENGGIDSLFGKMDTSGADSHCQGAVIAEGSVGLANAVQPTYSNAASADSIMSSKT 299

Query: 1026 EPV 1034
            EP+
Sbjct: 300  EPI 302


>ref|XP_003556888.1| PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Glycine max]
          Length = 446

 Score =  306 bits (785), Expect = 4e-81
 Identities = 163/303 (53%), Positives = 198/303 (65%), Gaps = 7/303 (2%)
 Frame = +3

Query: 147  MGQLCDFCGGQRSMVYCRSDSACLCLSCDRNVHSANALSRRHSRTLLCEKCCSQPATIRC 326
            MG +CDFCG QRSMVYCRSD+ACLCLSCDRNVHSANALS+RHSRTLLCE+C SQPA +RC
Sbjct: 38   MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLLCERCNSQPAFVRC 97

Query: 327  LEEKTSLCQNCDWNAHGASTSSSPHKRQTIHCYSGCPSAAELSRIWSFVLNFPSMDDQSC 506
            +EEK SLCQNCDW  HG STSSS HKRQ I+CYSGCPSAAELS IWSFVL   ++  +S 
Sbjct: 98   VEEKISLCQNCDWLGHGTSTSSSTHKRQAINCYSGCPSAAELSSIWSFVLEIAAI-SEST 156

Query: 507  CEQRTGLMSIDENVSSNCWDPPGNTNMLDDDASGEXXXXXXXXXXXXMGSSSMRVPSPIP 686
            CEQ  GLMSI+EN       PP + N+   D   +            +G+S M   S  P
Sbjct: 157  CEQELGLMSINENKCVGV--PPEDQNVSGSDEVTD----LPALNKSLVGASLMPESSSEP 210

Query: 687  SRVNQTAGFMESTKPKKDSSETKRVGICEAD-YFEDFNASDMELNCENYDELFGVSQSNS 863
              ++Q AG      PK     TK   + E D  ++DFN  +++L+ ENY+ELFG++ S+S
Sbjct: 211  CILDQPAGPTNECLPKLYCPATKCPALSEDDNLYDDFNMDEVDLDLENYEELFGMALSHS 270

Query: 864  EQLFENGGIDSLFGVKDLSVAASNCQGSLAGKGKVV------QPICXXXXXXXXXXXXKT 1025
            E+LFENGGIDSLFG K +S   SNCQ ++A +G  V      QP C            KT
Sbjct: 271  EELFENGGIDSLFGTKGMSAGDSNCQEAIAAEGSSVGQVNAMQPACSNAASADSILSTKT 330

Query: 1026 EPV 1034
            EP+
Sbjct: 331  EPI 333


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