BLASTX nr result

ID: Coptis24_contig00028704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028704
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263...   395   e-108
ref|XP_002532497.1| conserved hypothetical protein [Ricinus comm...   358   7e-99
ref|XP_003550799.1| PREDICTED: uncharacterized protein LOC100819...   359   7e-98
emb|CBI25595.3| unnamed protein product [Vitis vinifera]              360   1e-97
ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|2...   356   2e-97

>ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263642 [Vitis vinifera]
          Length = 554

 Score =  395 bits (1016), Expect(2) = e-108
 Identities = 202/312 (64%), Positives = 248/312 (79%), Gaps = 4/312 (1%)
 Frame = -2

Query: 976 VYTYTPTYYSSLHDTITSLCKNILPFSLKKRGLPTAEKKLSKQQSENLKWQQESFHRILN 797
           +Y+YTPTYYS+LHD+ITSLCK ILPFS KKR LP AE+KLSK QS+NLKWQQ+SFH+IL 
Sbjct: 1   MYSYTPTYYSTLHDSITSLCKTILPFSFKKRRLPAAEQKLSKLQSDNLKWQQDSFHQILK 60

Query: 796 LIGLHKEGMVPEKDVSAYRSHLLDTLIASPADQEQLTIIRDKLIFLQELLYAKCISVDEY 617
           L+GL KEG++ E +VS++RSHLL+TLIASPADQEQ  I+RDKL+FLQEL YAKCI+ DEY
Sbjct: 61  LMGLCKEGILAEHEVSSFRSHLLETLIASPADQEQPVILRDKLLFLQELFYAKCITADEY 120

Query: 616 HSSKRPLLQRLAVQGAEIEARDVIVAGQIAENSEEEWSNIDFKDEECLMDKENLESNKKS 437
           HSSKRPLLQRLAVQGAEIEARDVIVA Q  ENSEEEWS ID +DE+CL+ KE+  S  KS
Sbjct: 121 HSSKRPLLQRLAVQGAEIEARDVIVANQ-KENSEEEWSVIDLRDEQCLLSKESSNSKSKS 179

Query: 436 KHRSPMKRIKGAASMINFVSPHKSSKHKAKMGI--EAGNHSNANEAG--KENSYWGVPMK 269
           KH S +K+IKG AS+++F +PHK+ K++ +  I      HS  NE G  +EN +W + +K
Sbjct: 180 KHGSAIKQIKGVASVLSFTTPHKNVKNREEKSIIGPVSEHSGHNELGLSRENPFWNIHLK 239

Query: 268 AKESETASILMPESTPLQPIQVEKERGSTEKVKKKPFRTLFQREGNGSENNVPGPEERGA 89
            KESET SILMPES P++ ++VEK     +K KKK FRTLFQ+EG+    NVP  EE+ +
Sbjct: 240 EKESETRSILMPESIPVETVKVEK--SGADKAKKKVFRTLFQKEGS---ENVPESEEKVS 294

Query: 88  KSAKKQWGFDGL 53
           KS KKQWGF+GL
Sbjct: 295 KSGKKQWGFEGL 306



 Score = 23.5 bits (49), Expect(2) = e-108
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 42  KKNDSEDEAAPLPL 1
           K+N+ EDE  PLPL
Sbjct: 310 KRNNWEDETTPLPL 323


>ref|XP_002532497.1| conserved hypothetical protein [Ricinus communis]
           gi|223527772|gb|EEF29873.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 552

 Score =  358 bits (920), Expect(2) = 7e-99
 Identities = 194/324 (59%), Positives = 233/324 (71%), Gaps = 16/324 (4%)
 Frame = -2

Query: 979 MVYTYTPTYYSSLHDTITSLCKNILPFSLKKRGLPTAEKKLSKQQSENLKWQQESFHRIL 800
           MVYTYTPTYYS+LHD+ITSLCK ILPFS KKR LP AE+KLSK QS+NLKWQQ+S+H+IL
Sbjct: 1   MVYTYTPTYYSTLHDSITSLCKTILPFSFKKRRLPAAEQKLSKLQSDNLKWQQDSYHQIL 60

Query: 799 NLIGLHKEGMVPEKDVSAYRSHLLDTLIASPADQEQLTIIRDKLIFLQELLYAKCISVDE 620
           NL+GLHKEG++ E +VSA+R+HLL+TL+ASPA+QEQ  I+RDKLIFLQELLYAKCIS DE
Sbjct: 61  NLMGLHKEGILAESEVSAFRTHLLETLLASPAEQEQPLILRDKLIFLQELLYAKCISEDE 120

Query: 619 YHSSKRPLLQRLAVQGAEIEARDVIVAG--QIAENSEEEWSNIDFKDEECLMDKENLESN 446
           YHSSKRPLLQRLA QGAEIE RDVIVAG   + EN EEEWS ID KDE+CL+ KEN  S 
Sbjct: 121 YHSSKRPLLQRLAFQGAEIEPRDVIVAGPKDLKENPEEEWSVIDLKDEKCLVTKENFPSK 180

Query: 445 KKSKHRSPMKRIKGAASMINFVSPHKSSKH---KAKMGIEAGNHSNANEAGKENSYWGVP 275
            + K  S +K+IKGAA++  F S HK ++H   K+   IEA   S  N+   EN  W   
Sbjct: 181 NRPKPNSAIKQIKGAATIFGFGSSHKQARHREGKSIFEIEAKFSSTNNDT--ENPLWDSD 238

Query: 274 MKAKESETASILMPESTPLQPIQVEKERGSTEKVKKKPFRTLFQRE-----------GNG 128
            + K SE+ SILM  S P +     KE GST+  K+KPF+ LF +E           G G
Sbjct: 239 SRNKASESKSILMQGSLPNES---TKESGSTDNTKRKPFKALFLKEQREAHGGSGDTGGG 295

Query: 127 SENNVPGPEERGAKSAKKQWGFDG 56
              N     E+ +KSAKKQWGF+G
Sbjct: 296 GGENCLNSGEKISKSAKKQWGFEG 319



 Score = 29.6 bits (65), Expect(2) = 7e-99
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 42  KKNDSEDEAAPLPL 1
           KKNDS+DE APLPL
Sbjct: 324 KKNDSDDETAPLPL 337


>ref|XP_003550799.1| PREDICTED: uncharacterized protein LOC100819771 [Glycine max]
          Length = 490

 Score =  359 bits (922), Expect(2) = 7e-98
 Identities = 189/311 (60%), Positives = 230/311 (73%), Gaps = 3/311 (0%)
 Frame = -2

Query: 979 MVYTY-TPTYYSSLHDTITSLCKNILPFSLKKRGLPTAEKKLSKQQSENLKWQQESFHRI 803
           MVY+Y TPTYYS+LHD++TSLCK ILPFS KKR LP AE KLSK QS+NLKWQQ+SFH++
Sbjct: 1   MVYSYYTPTYYSTLHDSLTSLCKTILPFSFKKRPLPAAEHKLSKLQSDNLKWQQDSFHQV 60

Query: 802 LNLIGLHKEGMVPEKDVSAYRSHLLDTLIASPADQEQLTIIRDKLIFLQELLYAKCISVD 623
           LNL+GLHKEG+V E +VSA+R+HLLDTLIASP +QE   I+RDKL+FLQELLYAKCIS +
Sbjct: 61  LNLMGLHKEGIVAESEVSAFRTHLLDTLIASPPEQEHPVILRDKLLFLQELLYAKCISEE 120

Query: 622 EYHSSKRPLLQRLAVQGAEIEARDVIVA--GQIAENSEEEWSNIDFKDEECLMDKENLES 449
           EYHSSKRPLLQRLA QGA+IEARDVIVA      ENSEEEWS ID KDE+C ++KENL S
Sbjct: 121 EYHSSKRPLLQRLAAQGAQIEARDVIVARPKDSKENSEEEWSVIDLKDEKCWVNKENLGS 180

Query: 448 NKKSKHRSPMKRIKGAASMINFVSPHKSSKHKAKMGIEAGNHSNANEAGKENSYWGVPMK 269
             KS   S MK+IKGAA +  F    K+ + K+     +    +AN   +EN +W    K
Sbjct: 181 KSKSNQGSAMKQIKGAALVFGFGKGGKNGEEKSMFDSPS---LSANNESRENPFWDAQTK 237

Query: 268 AKESETASILMPESTPLQPIQVEKERGSTEKVKKKPFRTLFQREGNGSENNVPGPEERGA 89
            K+SE  SILM ES P +P+   KE G  +K+K+KPFRTLF +E +G     P  ++R  
Sbjct: 238 EKQSEGKSILMEESVPPEPV---KESGGLDKLKRKPFRTLFHKEQSGG----PEQDQRSG 290

Query: 88  KSAKKQWGFDG 56
           KS KKQWGF+G
Sbjct: 291 KSGKKQWGFEG 301



 Score = 25.4 bits (54), Expect(2) = 7e-98
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -3

Query: 42  KKNDSEDEAAPLPL 1
           ++N+SE+E APLPL
Sbjct: 306 RRNESEEETAPLPL 319


>emb|CBI25595.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  360 bits (925), Expect(2) = 1e-97
 Identities = 193/310 (62%), Positives = 229/310 (73%), Gaps = 2/310 (0%)
 Frame = -2

Query: 976 VYTYTPTYYSSLHDTITSLCKNILPFSLKKRGLPTAEKKLSKQQSENLKWQQESFHRILN 797
           +Y+YTPTYYS+LHD+ITSLCK ILPFS KKR LP AE+KLSK QS+NLKWQQ+SFH+IL 
Sbjct: 1   MYSYTPTYYSTLHDSITSLCKTILPFSFKKRRLPAAEQKLSKLQSDNLKWQQDSFHQILK 60

Query: 796 LIGLHKEGMVPEKDVSAYRSHLLDTLIASPADQEQLTIIRDKLIFLQELLYAKCISVDEY 617
           L+GL KEG++ E +VS++RSHLL+TLIASPADQEQ  I+RDKL+FLQEL YAKCI+ DEY
Sbjct: 61  LMGLCKEGILAEHEVSSFRSHLLETLIASPADQEQPVILRDKLLFLQELFYAKCITADEY 120

Query: 616 HSSKRPLLQRLAVQGAEIEARDVIVAGQIAENSEEEWSNIDFKDEECLMDKENLESNKKS 437
           HSSKRPLLQRLAVQGAEIEARDVIVA Q  ENSEEEWS ID +DE+CL+ KE+  S  KS
Sbjct: 121 HSSKRPLLQRLAVQGAEIEARDVIVANQ-KENSEEEWSVIDLRDEQCLLSKESSNSKSKS 179

Query: 436 KHRSPMKRIKGAASMINFVSPHKSSKHKAKMGIEAGNHSNANEAG--KENSYWGVPMKAK 263
           KH    K I G  S                       HS  NE G  +EN +W + +K K
Sbjct: 180 KHE---KSIIGPVS----------------------EHSGHNELGLSRENPFWNIHLKEK 214

Query: 262 ESETASILMPESTPLQPIQVEKERGSTEKVKKKPFRTLFQREGNGSENNVPGPEERGAKS 83
           ESET SILMPES P++ ++VEK     +K KKK FRTLFQ+EG+    NVP  EE+ +KS
Sbjct: 215 ESETRSILMPESIPVETVKVEK--SGADKAKKKVFRTLFQKEGS---ENVPESEEKVSKS 269

Query: 82  AKKQWGFDGL 53
            KKQWGF+GL
Sbjct: 270 GKKQWGFEGL 279



 Score = 23.5 bits (49), Expect(2) = 1e-97
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 42  KKNDSEDEAAPLPL 1
           K+N+ EDE  PLPL
Sbjct: 283 KRNNWEDETTPLPL 296


>ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|222866007|gb|EEF03138.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  356 bits (914), Expect(2) = 2e-97
 Identities = 194/321 (60%), Positives = 236/321 (73%), Gaps = 13/321 (4%)
 Frame = -2

Query: 979 MVYTYTPTYYSSLHDTITSLCKNILPFSLKKRGLPTAEKKLSKQQSENLKWQQESFHRIL 800
           MVYTYTP YYS+LHD+ITS+CK ILPFS KK+ L +AE +LSK QS+NLKWQQ+SFH+IL
Sbjct: 1   MVYTYTPAYYSTLHDSITSICKTILPFSFKKKRLTSAEHRLSKLQSDNLKWQQDSFHQIL 60

Query: 799 NLIGLHKEGMVPEKDVSAYRSHLLDTLIASPADQEQLTIIRDKLIFLQELLYAKCISVDE 620
           NL+GLHKEG++ E +VSA+++HLL+TLIASP + EQ  I+RDKL+FLQELLYAKCIS DE
Sbjct: 61  NLMGLHKEGILAENEVSAFKTHLLETLIASPLEHEQAVILRDKLVFLQELLYAKCISEDE 120

Query: 619 YHSSKRPLLQRLAVQGAEIEARDVIVAG--QIAENSEEEWSNIDFKDEECLMDKENLESN 446
           YHSSKRPLLQRLAVQGAEIE+RDVIVAG     E  EEEWS ID KDE+ L+ KE L+S 
Sbjct: 121 YHSSKRPLLQRLAVQGAEIESRDVIVAGPKDTKEKIEEEWSVIDLKDEKRLIGKETLQSI 180

Query: 445 KKSKHRSPMKRIKGAASMINFVSPHKSSKHKAKMG---IEAGNHSNANEAG-KENSYWGV 278
            +SK  S MK+IKGAAS+  F S HK SKHK +     IEA   S+ + +  +EN  W  
Sbjct: 181 NRSKPNSAMKQIKGAASVFGFGSDHKLSKHKEEKSIFEIEARLPSSGHVSNERENPLWDS 240

Query: 277 PMKAKESETASILMPESTPLQPIQVEKERGSTEKVKKKPFRTLFQRE-------GNGSEN 119
            +K KESET SILM  S P + +   KE  S +K K+KPF+TLF++E       G G   
Sbjct: 241 HLKDKESETKSILMQASLPNESV---KESASNDKPKRKPFKTLFRQEQREGDGGGGGGGA 297

Query: 118 NVPGPEERGAKSAKKQWGFDG 56
           N    EE+ +KSAKK WGFDG
Sbjct: 298 NGFNCEEKPSKSAKKPWGFDG 318



 Score = 26.9 bits (58), Expect(2) = 2e-97
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -3

Query: 42  KKNDSEDEAAPLPL 1
           KKNDS+ E APLPL
Sbjct: 323 KKNDSDGETAPLPL 336


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