BLASTX nr result
ID: Coptis24_contig00028698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028698 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBM42561.1| putative B-type response regulator 16 [Populus x... 57 1e-06 emb|CBM42560.1| putative B-type response regulator 15 [Populus x... 57 1e-06 ref|XP_002315852.1| type-b response regulator [Populus trichocar... 57 1e-06 ref|XP_002311532.1| type-b response regulator [Populus trichocar... 57 1e-06 ref|XP_002312648.1| type-b response regulator [Populus trichocar... 56 3e-06 >emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis] Length = 663 Score = 57.4 bits (137), Expect = 1e-06 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = +2 Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250 QAT LKLL ER+G FD++L+DVH P+M GF+LL++V ++PVI Sbjct: 69 QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114 >emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis] Length = 671 Score = 57.4 bits (137), Expect = 1e-06 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = +2 Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250 QAT LKLL ER+G FD++L+DVH P+M GF+LL++V ++PVI Sbjct: 69 QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114 >ref|XP_002315852.1| type-b response regulator [Populus trichocarpa] gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa] Length = 663 Score = 57.4 bits (137), Expect = 1e-06 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = +2 Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250 QAT LKLL ER+G FD++L+DVH P+M GF+LL++V ++PVI Sbjct: 69 QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114 >ref|XP_002311532.1| type-b response regulator [Populus trichocarpa] gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa] Length = 303 Score = 57.4 bits (137), Expect = 1e-06 Identities = 26/46 (56%), Positives = 36/46 (78%) Frame = +2 Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250 QAT LKLL ER+G FD++L+DVH P+M GF+LL++V ++PVI Sbjct: 40 QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 85 >ref|XP_002312648.1| type-b response regulator [Populus trichocarpa] gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa] Length = 642 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/51 (50%), Positives = 37/51 (72%) Frame = +2 Query: 116 ATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVICEFSSL 268 A D L LL ER+GG+DI+++DV+ P+M GF+LL+ V ++PVI F SL Sbjct: 50 ARDALNLLRERKGGYDIVISDVYMPDMDGFKLLEQVGLEMDLPVISRFFSL 100