BLASTX nr result

ID: Coptis24_contig00028698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028698
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBM42561.1| putative B-type response regulator 16 [Populus x...    57   1e-06
emb|CBM42560.1| putative B-type response regulator 15 [Populus x...    57   1e-06
ref|XP_002315852.1| type-b response regulator [Populus trichocar...    57   1e-06
ref|XP_002311532.1| type-b response regulator [Populus trichocar...    57   1e-06
ref|XP_002312648.1| type-b response regulator [Populus trichocar...    56   3e-06

>emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
          Length = 663

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +2

Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250
           QAT  LKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114


>emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
          Length = 671

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +2

Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250
           QAT  LKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114


>ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
           gi|222864892|gb|EEF02023.1| type-b response regulator
           [Populus trichocarpa]
          Length = 663

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +2

Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250
           QAT  LKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 69  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 114


>ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
           gi|222851352|gb|EEE88899.1| type-b response regulator
           [Populus trichocarpa]
          Length = 303

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +2

Query: 113 QATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVI 250
           QAT  LKLL ER+G FD++L+DVH P+M GF+LL++V    ++PVI
Sbjct: 40  QATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVI 85


>ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
           gi|222852468|gb|EEE90015.1| type-b response regulator
           [Populus trichocarpa]
          Length = 642

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +2

Query: 116 ATDTLKLLHERQGGFDIILTDVHRPEMGGFELLDIVKKYFNIPVICEFSSL 268
           A D L LL ER+GG+DI+++DV+ P+M GF+LL+ V    ++PVI  F SL
Sbjct: 50  ARDALNLLRERKGGYDIVISDVYMPDMDGFKLLEQVGLEMDLPVISRFFSL 100


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