BLASTX nr result

ID: Coptis24_contig00028670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028670
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]    65   7e-14
emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]    66   7e-14
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]    67   9e-14
emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]    67   9e-14
emb|CAN80631.1| hypothetical protein VITISV_026658 [Vitis vinifera]    64   1e-13

>emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]
          Length = 1540

 Score = 65.1 bits (157), Expect(2) = 7e-14
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +2

Query: 89   PHDQGGLGIRRVQAMNQVFLGEWIWRYAVEQDALWRKVVDAKYG 220
            P ++GGLGIR++  +N+  LG+W+WRYA E+D LW+K +  KYG
Sbjct: 1315 PKEEGGLGIRKIDLLNKALLGKWVWRYAYEKDNLWKKAIGVKYG 1358



 Score = 36.6 bits (83), Expect(2) = 7e-14
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 3    KIEKVTRDFLWGPQEGKKKMHLIAWNKVF 89
            +IEK+ RDFLWG    + K+HLI W  V+
Sbjct: 1285 RIEKIQRDFLWGGGSLEGKVHLINWKVVY 1313


>emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]
          Length = 1522

 Score = 65.9 bits (159), Expect(2) = 7e-14
 Identities = 24/42 (57%), Positives = 34/42 (80%)
 Frame = +2

Query: 95   DQGGLGIRRVQAMNQVFLGEWIWRYAVEQDALWRKVVDAKYG 220
            + GGLGIR++  +N+  LG+WIWR+A+E+D  WRKVV+ KYG
Sbjct: 1164 ENGGLGIRKIDLLNKALLGKWIWRFAIEEDLFWRKVVEVKYG 1205



 Score = 35.8 bits (81), Expect(2) = 7e-14
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 3    KIEKVTRDFLWGPQEGKKKMHLIAW 77
            ++EK+ RDFLWG    ++KMHLI W
Sbjct: 1132 RLEKLQRDFLWGGGXLERKMHLINW 1156


>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 66.6 bits (161), Expect(2) = 9e-14
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +2

Query: 95   DQGGLGIRRVQAMNQVFLGEWIWRYAVEQDALWRKVVDAKYG 220
            D+GGLGIRR+  +N+  LG+WIWR+AVE+D LW+KV+  KYG
Sbjct: 1761 DKGGLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKYG 1802



 Score = 34.7 bits (78), Expect(2) = 9e-14
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 3    KIEKVTRDFLWGPQEGKKKMHLIAWNKV 86
            ++EK+ RDFLWG     +K+HL+ W  V
Sbjct: 1729 RLEKLQRDFLWGGGNTGRKIHLVNWKVV 1756


>emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]
          Length = 1416

 Score = 66.6 bits (161), Expect(2) = 9e-14
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +2

Query: 95   DQGGLGIRRVQAMNQVFLGEWIWRYAVEQDALWRKVVDAKYG 220
            D+GGLGIRR+  +N+  LG+WIWR+AVE+D LW+KV+  KYG
Sbjct: 1233 DKGGLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKYG 1274



 Score = 34.7 bits (78), Expect(2) = 9e-14
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 3    KIEKVTRDFLWGPQEGKKKMHLIAWNKV 86
            ++EK+ RDFLWG     +K+HL+ W  V
Sbjct: 1201 RLEKLQRDFLWGGGNTGRKIHLVNWKVV 1228


>emb|CAN80631.1| hypothetical protein VITISV_026658 [Vitis vinifera]
          Length = 1062

 Score = 63.5 bits (153), Expect(2) = 1e-13
 Identities = 23/42 (54%), Positives = 35/42 (83%)
 Frame = +2

Query: 95  DQGGLGIRRVQAMNQVFLGEWIWRYAVEQDALWRKVVDAKYG 220
           D+GGLG+R++  +N+  LG+WIWRYA ++D+LWR+V+  KYG
Sbjct: 273 DKGGLGLRKLALLNKALLGKWIWRYACDKDSLWRQVIKVKYG 314



 Score = 37.7 bits (86), Expect(2) = 1e-13
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 3   KIEKVTRDFLWGPQEGKKKMHLIAWNKV 86
           +IEKV RDFLWG    ++K+HL+ W  V
Sbjct: 241 RIEKVQRDFLWGGGNMERKVHLVKWEVV 268


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