BLASTX nr result

ID: Coptis24_contig00028655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028655
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   186   1e-45
ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arab...   186   1e-45
gb|AAF97333.1|AC023628_14 Hypothetical protein [Arabidopsis thal...   184   5e-45
ref|NP_563620.1| L-fucokinase/GDP-L-fucose pyrophosphorylase [Ar...   184   5e-45
ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose py...   181   4e-44

>ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
           gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY
           PROTEIN: bifunctional fucokinase/fucose
           pyrophosphorylase-like [Cucumis sativus]
          Length = 1065

 Score =  186 bits (473), Expect = 1e-45
 Identities = 97/147 (65%), Positives = 110/147 (74%), Gaps = 8/147 (5%)
 Frame = +3

Query: 9   EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 188
           +K D+   LRKSWYHLRLSVR P+RVPTWDAI+LTAASPEQAQLYEWQLNRAKR+GRIA 
Sbjct: 11  KKADLHSILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAQLYEWQLNRAKRIGRIAH 70

Query: 189 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVE--------NYRXXXXXXXXXXX 344
           STITLAVPDP G RIGSGAATLNA+ AL++ + N  +         + R           
Sbjct: 71  STITLAVPDPDGQRIGSGAATLNAIYALAKHYHNLGLVHSTEVSFISARSKPRFXASALL 130

Query: 345 VITFLTNKHILLLHAGGDSKRVPWANP 425
            + F + KHILLLHAGGDSKRVPWANP
Sbjct: 131 WLCFTSKKHILLLHAGGDSKRVPWANP 157


>ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp.
           lyrata] gi|297337924|gb|EFH68341.1| hypothetical protein
           ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/139 (66%), Positives = 108/139 (77%)
 Frame = +3

Query: 9   EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 188
           +K D++  LRKSWYHLRLSVR P RVPTWDAI+LTAASPEQA+LYEWQL RAKRMGRIA+
Sbjct: 6   KKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIAS 65

Query: 189 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFLTNK 368
           ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +              V  FL+ K
Sbjct: 66  STVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDPGPEVEVANGTCKWV-RFLSAK 124

Query: 369 HILLLHAGGDSKRVPWANP 425
           H+L+LHAGGDSKRVPWANP
Sbjct: 125 HVLMLHAGGDSKRVPWANP 143


>gb|AAF97333.1|AC023628_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1113

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/139 (64%), Positives = 108/139 (77%)
 Frame = +3

Query: 9   EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 188
           +K D++  LRKSWYHLRLSVR P RVPTWDAI+LTAASPEQA+LY+WQL RAKRMGRIA+
Sbjct: 6   KKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRIAS 65

Query: 189 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFLTNK 368
           ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +               + F++ K
Sbjct: 66  STVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFD-LGPEMEVANGACKWVRFISAK 124

Query: 369 HILLLHAGGDSKRVPWANP 425
           H+L+LHAGGDSKRVPWANP
Sbjct: 125 HVLMLHAGGDSKRVPWANP 143


>ref|NP_563620.1| L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana]
           gi|332313388|sp|Q9LNJ9.2|FKGP_ARATH RecName:
           Full=Bifunctional fucokinase/fucose pyrophosphorylase;
           Short=AtFKGP; Includes: RecName: Full=L-fucokinase;
           Includes: RecName: Full=Fucose-1-phosphate
           guanylyltransferase; AltName: Full=GDP-fucose
           pyrophosphorylase gi|332189134|gb|AEE27255.1|
           L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis
           thaliana]
          Length = 1055

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/139 (64%), Positives = 108/139 (77%)
 Frame = +3

Query: 9   EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 188
           +K D++  LRKSWYHLRLSVR P RVPTWDAI+LTAASPEQA+LY+WQL RAKRMGRIA+
Sbjct: 6   KKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRIAS 65

Query: 189 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFLTNK 368
           ST+TLAVPDP G RIGSGAATLNA+ AL+R ++    +               + F++ K
Sbjct: 66  STVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFD-LGPEMEVANGACKWVRFISAK 124

Query: 369 HILLLHAGGDSKRVPWANP 425
           H+L+LHAGGDSKRVPWANP
Sbjct: 125 HVLMLHAGGDSKRVPWANP 143


>ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like
           [Glycine max]
          Length = 1049

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/139 (66%), Positives = 102/139 (73%)
 Frame = +3

Query: 9   EKIDVSKTLRKSWYHLRLSVRDPNRVPTWDAIILTAASPEQAQLYEWQLNRAKRMGRIAT 188
           +K D++  LRKSWYHLRLSVRDP RVPTWDAI+LTAASPEQAQLY WQL RAKRMGRI+ 
Sbjct: 12  QKEDLASLLRKSWYHLRLSVRDPCRVPTWDAIVLTAASPEQAQLYNWQLERAKRMGRISA 71

Query: 189 STITLAVPDPHGARIGSGAATLNALLALSRFFQNQQVENYRXXXXXXXXXXXVITFLTNK 368
           ST+TLAVPDP G RIGSGAATLNA+ AL+R                       +  L  K
Sbjct: 72  STVTLAVPDPLGQRIGSGAATLNAIHALARCINTN------------------VFLLAKK 113

Query: 369 HILLLHAGGDSKRVPWANP 425
           HILLLHAGGDSKRVPWANP
Sbjct: 114 HILLLHAGGDSKRVPWANP 132


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