BLASTX nr result

ID: Coptis24_contig00028636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028636
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522036.1| conserved hypothetical protein [Ricinus comm...   166   2e-39
ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula] ...   162   2e-38
ref|XP_004136917.1| PREDICTED: uncharacterized protein LOC101210...   161   7e-38
ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-38
ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260...   157   7e-37

>ref|XP_002522036.1| conserved hypothetical protein [Ricinus communis]
           gi|223538635|gb|EEF40236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  166 bits (421), Expect = 2e-39
 Identities = 80/119 (67%), Positives = 100/119 (84%)
 Frame = -2

Query: 536 LLYSVLGDKAKNKGSFRLLKAEASAQTFVKMVFGVEKELKEGYGLADWKGFPDWKTKPES 357
           LL SVLG KA +KG F+LLKA+ S QTFVK+ F VEK+LKEG    D++G+P W+TKPES
Sbjct: 314 LLASVLGPKANDKGFFKLLKADVSTQTFVKIGFEVEKKLKEGDSF-DFQGYPAWRTKPES 372

Query: 356 IRMHFEVLARVDGEKILPEKVVQVDPVLVEDSVAPNVLMGNVTMSKVPIVHPPISPFAL 180
           +RMHFEVL +VDGEK++PEKV+QV+PV++ED+V  NVLMGNVTMSK+PI HPP +PF L
Sbjct: 373 VRMHFEVLGKVDGEKVIPEKVMQVNPVIIEDTVEANVLMGNVTMSKIPIFHPPSNPFTL 431


>ref|XP_003593345.1| Nicotiana tabacum ORF [Medicago truncatula]
           gi|355482393|gb|AES63596.1| Nicotiana tabacum ORF
           [Medicago truncatula]
          Length = 415

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/119 (65%), Positives = 102/119 (85%)
 Frame = -2

Query: 536 LLYSVLGDKAKNKGSFRLLKAEASAQTFVKMVFGVEKELKEGYGLADWKGFPDWKTKPES 357
           LL SVLG KA  KGSFRLLKA+ SAQTFVK+ F  EK+LKEG G++ ++GFP+W+TKP++
Sbjct: 298 LLSSVLGPKANEKGSFRLLKADVSAQTFVKIGFQAEKKLKEGDGIS-FEGFPEWRTKPDT 356

Query: 356 IRMHFEVLARVDGEKILPEKVVQVDPVLVEDSVAPNVLMGNVTMSKVPIVHPPISPFAL 180
           +R+HFEVLA+VDG+K++PE+V+QV+PV+ EDSVAPN+L  N TMSK+P+V PP  PFAL
Sbjct: 357 VRLHFEVLAKVDGDKVIPERVMQVNPVVTEDSVAPNMLTNNGTMSKMPLVQPPPIPFAL 415


>ref|XP_004136917.1| PREDICTED: uncharacterized protein LOC101210086 [Cucumis sativus]
           gi|449511249|ref|XP_004163904.1| PREDICTED:
           uncharacterized protein LOC101230063 [Cucumis sativus]
          Length = 435

 Score =  161 bits (407), Expect = 7e-38
 Identities = 77/119 (64%), Positives = 101/119 (84%)
 Frame = -2

Query: 536 LLYSVLGDKAKNKGSFRLLKAEASAQTFVKMVFGVEKELKEGYGLADWKGFPDWKTKPES 357
           LL S+LG KA  KGSF+LLKA  SAQT V++ FGV+K+L+EG G+ D +GFP+W+TKPE+
Sbjct: 318 LLTSLLGPKANGKGSFKLLKANVSAQTTVRIGFGVDKKLEEGDGI-DMEGFPEWRTKPEA 376

Query: 356 IRMHFEVLARVDGEKILPEKVVQVDPVLVEDSVAPNVLMGNVTMSKVPIVHPPISPFAL 180
           +R+HFEVLA +DGE+I+PE+V+QV PV+VED+VAPNVL+GNV+MSK PIV+ P  PF L
Sbjct: 377 VRLHFEVLATLDGERIIPERVMQVKPVIVEDTVAPNVLLGNVSMSKTPIVYTPSDPFTL 435


>ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|222850354|gb|EEE87901.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  160 bits (406), Expect = 9e-38
 Identities = 78/117 (66%), Positives = 99/117 (84%)
 Frame = -2

Query: 536 LLYSVLGDKAKNKGSFRLLKAEASAQTFVKMVFGVEKELKEGYGLADWKGFPDWKTKPES 357
           LL SVLG +A  KG F+LLKA+ SAQTFVK+ FGVEK LKEG GL D +  P W+TKPES
Sbjct: 314 LLASVLGSRANKKGYFKLLKADVSAQTFVKIGFGVEKLLKEGDGL-DLEAVPWWRTKPES 372

Query: 356 IRMHFEVLARVDGEKILPEKVVQVDPVLVEDSVAPNVLMGNVTMSKVPIVHPPISPF 186
           +RMHFEVLA+VDG+K++PE+VVQV+PV++ED+VAP++L GNV+MS+ P VHPP +PF
Sbjct: 373 VRMHFEVLAKVDGQKVVPERVVQVNPVIIEDTVAPHLLTGNVSMSRTPAVHPPSNPF 429


>ref|XP_002268574.2| PREDICTED: uncharacterized protein LOC100260026 [Vitis vinifera]
          Length = 444

 Score =  157 bits (398), Expect = 7e-37
 Identities = 76/119 (63%), Positives = 98/119 (82%)
 Frame = -2

Query: 536 LLYSVLGDKAKNKGSFRLLKAEASAQTFVKMVFGVEKELKEGYGLADWKGFPDWKTKPES 357
           LL S+LG KA  +GSFRLLKA+ SAQTFVK+ FGVEK+LKEG G  + +G P+W+TKP++
Sbjct: 307 LLASLLGPKASKEGSFRLLKADVSAQTFVKIGFGVEKKLKEGDGF-NLEGLPEWRTKPKA 365

Query: 356 IRMHFEVLARVDGEKILPEKVVQVDPVLVEDSVAPNVLMGNVTMSKVPIVHPPISPFAL 180
           + MHFEVLA+V+G K++PE++V V+PV+ ED+VAPNVL GN TMSK+PIVH P  PF L
Sbjct: 366 VTMHFEVLAKVEGNKVVPERIVPVNPVVGEDTVAPNVLSGNATMSKIPIVHVPSDPFTL 424


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