BLASTX nr result

ID: Coptis24_contig00028623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028623
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253...   126   2e-27
ref|XP_002511418.1| DNA binding protein, putative [Ricinus commu...   125   4e-27
ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811...   120   2e-25

>ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|222859319|gb|EEE96866.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/120 (59%), Positives = 95/120 (79%), Gaps = 2/120 (1%)
 Frame = -1

Query: 442 YIKELRERVEMLKR-KKQRMMRSTRNEYGTK-SVTVGVTLPVLELRETDSTLEVILVSSL 269
           YIK+LRERVE LKR K+++ + +TR     K S+ +G+ LPV+ELR+  ST+EV+L+S L
Sbjct: 59  YIKQLRERVEGLKRVKEEQAITTTRTSSSAKTSMMIGLRLPVVELRDFGSTIEVVLISGL 118

Query: 268 DKNFMFYQVIGVLEEEGADVVNASFSIVGDKVFHTIHSQVMSFRVGVEISRLSARLNELL 89
           +KNFMFY+VI VL +EGA+V++AS+S VGDKVFHTIH+QV   RVGVE SR+  RL EL+
Sbjct: 119 NKNFMFYEVINVLSDEGAEVISASYSTVGDKVFHTIHAQVRISRVGVETSRVCERLQELI 178


>ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|222869157|gb|EEF06288.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  134 bits (336), Expect = 1e-29
 Identities = 69/119 (57%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = -1

Query: 442 YIKELRERVEMLKRKKQRMMRSTR-NEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLD 266
           YIK++RERVE LKR K++ + + + +  G  S+ +G+ LPV+ELR+  S++EV+LVS L+
Sbjct: 59  YIKQMRERVEKLKRVKEQAITTIQTSRSGMTSMMIGLRLPVIELRDFGSSIEVVLVSGLN 118

Query: 265 KNFMFYQVIGVLEEEGADVVNASFSIVGDKVFHTIHSQVMSFRVGVEISRLSARLNELL 89
           KNFMFY+VI VL +EGA+VV+AS+S VGDKVFHTIH+QV   RVGVE SR+  RL EL+
Sbjct: 119 KNFMFYEVITVLSDEGAEVVSASYSTVGDKVFHTIHAQVRISRVGVETSRVWERLQELI 177


>ref|XP_002279841.1| PREDICTED: uncharacterized protein LOC100253569 [Vitis vinifera]
           gi|297733800|emb|CBI15047.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/120 (55%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
 Frame = -1

Query: 442 YIKELRERVEMLKRKKQRMMR-STRNEYGTKSVTVGVTLPVLELRETDSTLEVILVSSLD 266
           YIK+L+ER+E LK +K+   R +  N     +V +G+ LPV++LR+  S+LEV+L+S L+
Sbjct: 59  YIKQLKERIEELKGRKELATRVAGTNNNLIDAVMIGLRLPVIDLRDLGSSLEVMLISGLN 118

Query: 265 KNFMFYQVIGVLEEEGADVVNASFSIVGDKVFHTIHSQVMSFRVGVEISRLSARLNELLF 86
           KNFM Y+VI VLEEEGA+VV+AS S VGDKVFH++H+QV   RVGVE SR+  RL EL++
Sbjct: 119 KNFMLYEVISVLEEEGAEVVSASVSTVGDKVFHSLHAQVKISRVGVETSRVWQRLQELIY 178


>ref|XP_002511418.1| DNA binding protein, putative [Ricinus communis]
           gi|223550533|gb|EEF52020.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 173

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/114 (57%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
 Frame = -1

Query: 442 YIKELRERVEMLKRKKQRMMRS----TRNEYGTKSVTVGVTLPVLELRETDSTLEVILVS 275
           YIK L+ER+E LK+ K++ MRS    + N     + T+G  LP++ELR+  S++EVIL+S
Sbjct: 60  YIKHLKERIEKLKKMKEQAMRSLATNSTNNNALDATTMGSRLPMIELRDLGSSIEVILIS 119

Query: 274 SLDKNFMFYQVIGVLEEEGADVVNASFSIVGDKVFHTIHSQVMSFRVGVEISRL 113
            L KNFM Y+VI ++EEEGA+VV+ASFS VGDKVFH IH+QV   RVGVE SRL
Sbjct: 120 GLKKNFMLYEVITIVEEEGAEVVSASFSTVGDKVFHIIHAQVKISRVGVETSRL 173


>ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811485 [Glycine max]
          Length = 191

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/120 (50%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = -1

Query: 442 YIKELRERVEMLKRKKQRMMRS--TRNEYGTKSVTVGVTLPVLELRETDSTLEVILVSSL 269
           YIK L+ER+E LK +K+++M    + N+       +G  LP+LE+++  S +EV+L+S L
Sbjct: 62  YIKRLKERIEKLKGEKEKIMNMMMSSNQNNNSIFNIGSQLPLLEIKDLGSGIEVMLISGL 121

Query: 268 DKNFMFYQVIGVLEEEGADVVNASFSIVGDKVFHTIHSQVMSFRVGVEISRLSARLNELL 89
           +KNFM Y+VI VLEEEGA+VV A+FS V DK+F+T+H+QV   RVGVE +R+  RL EL+
Sbjct: 122 NKNFMLYEVISVLEEEGAEVVTANFSTVADKIFYTVHAQVKISRVGVEPTRVYQRLQELI 181


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