BLASTX nr result
ID: Coptis24_contig00028619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028619 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002530400.1| conserved hypothetical protein [Ricinus comm... 57 2e-06 ref|XP_003600816.1| hypothetical protein MTR_3g069720 [Medicago ... 57 2e-06 ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263... 56 3e-06 emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera] 56 3e-06 >ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1| predicted protein [Populus trichocarpa] Length = 428 Score = 66.2 bits (160), Expect = 3e-09 Identities = 31/42 (73%), Positives = 36/42 (85%), Gaps = 2/42 (4%) Frame = +2 Query: 11 VDFNIKGLSMDCFLPPGDLKKEQEGYDSV--ATNARLPFRTR 130 VDFNIKGLSMDCFLPP D+KKE+EG D+V + NARLPF+ R Sbjct: 357 VDFNIKGLSMDCFLPPSDIKKEEEGCDNVVISNNARLPFKIR 398 >ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis] gi|223530049|gb|EEF31970.1| conserved hypothetical protein [Ricinus communis] Length = 425 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/40 (67%), Positives = 30/40 (75%) Frame = +2 Query: 11 VDFNIKGLSMDCFLPPGDLKKEQEGYDSVATNARLPFRTR 130 VDFNIKGLSMDCFLPP DLKK+ E V NA+LP + R Sbjct: 356 VDFNIKGLSMDCFLPPSDLKKDGEESYVVTGNAKLPLKMR 395 >ref|XP_003600816.1| hypothetical protein MTR_3g069720 [Medicago truncatula] gi|355489864|gb|AES71067.1| hypothetical protein MTR_3g069720 [Medicago truncatula] Length = 489 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 6/46 (13%) Frame = +2 Query: 11 VDFNIKGLSMDCFLPPGDLKKEQE------GYDSVATNARLPFRTR 130 VDFNIKGLS+DCFLPP DLK+EQE G TNA+LP++ R Sbjct: 415 VDFNIKGLSIDCFLPPSDLKREQEETGQCGGGVVTGTNAKLPYKIR 460 >ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera] gi|296086114|emb|CBI31555.3| unnamed protein product [Vitis vinifera] Length = 426 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 2/40 (5%) Frame = +2 Query: 11 VDFNIKGLSMDCFLPPGDLKK-EQEGYD-SVATNARLPFR 124 VDFNIKGLS DCFLPPGDLKK ++EG D V +N +LPF+ Sbjct: 355 VDFNIKGLSTDCFLPPGDLKKVDEEGCDVVVGSNTKLPFK 394 >emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera] Length = 426 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 2/40 (5%) Frame = +2 Query: 11 VDFNIKGLSMDCFLPPGDLKK-EQEGYD-SVATNARLPFR 124 VDFNIKGLS DCFLPPGDLKK ++EG D V +N +LPF+ Sbjct: 355 VDFNIKGLSXDCFLPPGDLKKVDEEGCDVVVGSNTKLPFK 394