BLASTX nr result

ID: Coptis24_contig00028609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028609
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    98   8e-19
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/146 (32%), Positives = 75/146 (51%)
 Frame = +1

Query: 25  LIFNILKLEGKKSVLDMGSFHIASQLFVIRPWRTFVEAETRELKTIPIWVVVKGLPMEMW 204
           + F    L   + +L  G +H+  +  ++R W   +  ET    ++P+W+ +  +P+E+W
Sbjct: 6   ICFQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELW 65

Query: 205 NKDGFSQVGSAIGIPMFTDRLTENMSRTDYARMCVEIDTDCSYPEGVPVILDQRSVYKVA 384
              G   V SAIG P+  D  T+   R  YAR+CVE++ D + P  + V L +   + V 
Sbjct: 66  TDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNL-RGEEFIVP 124

Query: 385 FEYNWKPPRCMGCKIFGHLD*RCPKK 462
             Y WKP +C  C  FGH    CPKK
Sbjct: 125 VTYEWKPRKCNLCHSFGHSQSTCPKK 150


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/144 (31%), Positives = 75/144 (52%)
 Frame = +1

Query: 22  FLIFNILKLEGKKSVLDMGSFHIASQLFVIRPWRTFVEAETRELKTIPIWVVVKGLPMEM 201
           F IFN   ++   +VL+   +H+A++  V++ W+  ++    +L  +P+WV +  +P+E 
Sbjct: 194 FFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEY 253

Query: 202 WNKDGFSQVGSAIGIPMFTDRLTENMSRTDYARMCVEIDTDCSYPEGVPVILDQRSVYKV 381
           W   G S V SA+G+P+  D  T    R  YAR+CVEID   +  +   +         +
Sbjct: 254 WTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITI 313

Query: 382 AFEYNWKPPRCMGCKIFGHLD*RC 453
           + EY W P +C  C +FGH    C
Sbjct: 314 SAEYEWIPSKCSNCNVFGHTTALC 337


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = +1

Query: 52  GKKSVLDMGS-FHIASQLFVIRPWRTFVEAETRELKTIPIWVVVKGLPMEMWNKDGFSQV 228
           GK+  L  G  F+  S+ F+++PW   +  E +ELK+ PIW+ +  L + +W+ +   ++
Sbjct: 88  GKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLWSPEALGKI 147

Query: 229 GSAIGIPMFTDRLTENMSRTDYARMCVEIDTDCSYPEGVPVILDQRSVYKVAFEYNWKP- 405
            S +G P+F D +T +     +AR+CVE+D D   P+ V +  D+   Y    EY W+P 
Sbjct: 148 ASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQPT 207

Query: 406 PRCMGCKIFGHLD*RCPKK 462
            RC  C   GH D  CP++
Sbjct: 208 SRCSYCLHLGHSD-SCPRR 225


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/139 (32%), Positives = 73/139 (52%)
 Frame = +1

Query: 22  FLIFNILKLEGKKSVLDMGSFHIASQLFVIRPWRTFVEAETRELKTIPIWVVVKGLPMEM 201
           F IFN   ++   +VL+   +H+A+   V++ W+  ++    +L  +P+WV +  +P+E 
Sbjct: 194 FFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDDLARVPVWVWLYNVPLEY 253

Query: 202 WNKDGFSQVGSAIGIPMFTDRLTENMSRTDYARMCVEIDTDCSYPEGVPVILDQRSVYKV 381
           W   G S V SAIG+P+  D  T    R  YAR+CVEID   +  +   +         +
Sbjct: 254 WTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITI 313

Query: 382 AFEYNWKPPRCMGCKIFGH 438
           + EY W P +C  C +FGH
Sbjct: 314 SAEYEWIPSKCSNCNVFGH 332


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = +1

Query: 52  GKKSVLDMGS-FHIASQLFVIRPWRTFVEAETRELKTIPIWVVVKGLPMEMWNKDGFSQV 228
           GK   L  G  F+  S+ F+++PW   +  E +ELK+ P+W+ +  L + +W+ +  S++
Sbjct: 88  GKVLALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKI 147

Query: 229 GSAIGIPMFTDRLTENMSRTDYARMCVEIDTDCSYPEGVPVILDQRSVYKVAFEYNWKP- 405
            S +G P+F D +T +     +AR+CVE+D D   P+ V +  D+   Y    EY W+P 
Sbjct: 148 ASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEWQPT 207

Query: 406 PRCMGCKIFGHLD*RCPKK 462
            RC  C   GH D  CP++
Sbjct: 208 SRCSYCLHLGHSD-SCPRR 225


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