BLASTX nr result

ID: Coptis24_contig00028598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028598
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   207   9e-52
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat...   205   4e-51
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   199   3e-49
ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   193   1e-47
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   191   5e-47

>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/118 (84%), Positives = 106/118 (89%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 QGNGDCCIAHKVFSGILRSDVTCTACGFTSTTYDPCVDISLDLEPSQGGSTK-ASAKSHH 175
           QGNG+CCIAH+VFSGILRSDV C ACGFTSTTYDPCVDISLDLEP+QG STK  S KSHH
Sbjct: 330 QGNGECCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQGVSTKMGSTKSHH 389

Query: 174 AYNGETESMVSGQHSGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 1
           + NGE +SM S Q+ G STLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK
Sbjct: 390 SCNGEADSMNSSQNCGTSTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 447


>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  205 bits (521), Expect = 4e-51
 Identities = 98/118 (83%), Positives = 106/118 (89%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 QGNGDCCIAHKVFSGILRSDVTCTACGFTSTTYDPCVDISLDLEPSQGGSTK-ASAKSHH 175
           QG+GDCCIAH++FSGILRSDV C ACGFTSTTYDPCVDISLDLEP QGG  K AS K+HH
Sbjct: 320 QGHGDCCIAHRIFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPQQGGFGKHASMKAHH 379

Query: 174 AYNGETESMVSGQHSGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 1
           + NGET+ M + Q+ GISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK
Sbjct: 380 SCNGETDCMGASQNCGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 437


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/118 (80%), Positives = 105/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 QGNGDCCIAHKVFSGILRSDVTCTACGFTSTTYDPCVDISLDLEPSQGGSTK-ASAKSHH 175
           +GNGDCCIAHKVFSGILRSDVTC ACGFTSTTYDPC+DISLDLEP+QGGSTK  +A S+H
Sbjct: 335 EGNGDCCIAHKVFSGILRSDVTCMACGFTSTTYDPCIDISLDLEPNQGGSTKITTASSNH 394

Query: 174 AYNGETESMVSGQHSGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 1
           + NGE + M S Q+ G STLMGCL RFTR ERLGSDQKFFC+QCQVRQE+LKQMSIRK
Sbjct: 395 SCNGEPDCMNSSQNCGTSTLMGCLKRFTRAERLGSDQKFFCRQCQVRQETLKQMSIRK 452


>ref|XP_003542653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 594

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/118 (79%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 QGNGDCCIAHKVFSGILRSDVTCTACGFTSTTYDPCVDISLDLEPSQGGSTK-ASAKSHH 175
           +GNGDCCIAHKVFSGILRSDVTC ACGFTSTTYDPC+DISLDLEP+Q GSTK A+A S+H
Sbjct: 337 EGNGDCCIAHKVFSGILRSDVTCMACGFTSTTYDPCIDISLDLEPNQWGSTKMATATSNH 396

Query: 174 AYNGETESMVSGQHSGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 1
           + NGE + M S Q  G STLMGCL RFTR ERLGSDQK FC+QCQVRQE+LKQMSIRK
Sbjct: 397 SCNGEADCMNSSQICGTSTLMGCLKRFTRAERLGSDQKIFCRQCQVRQETLKQMSIRK 454


>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/118 (77%), Positives = 104/118 (88%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 QGNGDCCIAHKVFSGILRSDVTCTACGFTSTTYDPCVDISLDLEPSQGGSTK-ASAKSHH 175
           QGNGDCCIAH+VFSGILRSDV C ACGFTSTTYDPCVDISLDLEP+ GGS K A+A+S+ 
Sbjct: 345 QGNGDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNLGGSAKMAAARSNL 404

Query: 174 AYNGETESMVSGQHSGISTLMGCLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRK 1
             NGE + M S Q+  +S+L+GCLD+FTRPE+LGSDQKFFCQQCQVRQESLKQMSIRK
Sbjct: 405 PCNGEADCMNSSQNQRLSSLVGCLDQFTRPEKLGSDQKFFCQQCQVRQESLKQMSIRK 462


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